| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_0802 |
|---|
| Symbol | |
|---|
| ID | 4656442 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | - |
|---|
| Start bp | 906260 |
|---|
| End bp | 907621 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639810761 |
|---|
| Product | TolC family type I secretion outer membrane protein |
|---|
| Protein accession | YP_958086 |
|---|
| Protein GI | 120553735 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1538] Outer membrane protein |
|---|
| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAC GTTTACTTCC AGGTTTGATC ACCCTGCTGG CCGCCCAGCC CGCTTTCTCT
CTGGATCTTG TGGAGGCCTA CGAGCAGGCA CTGTCATACG ACTCCGGCAT CGCCTCAGCC
TTGGCACAGT TTCAGGCCCA ACAAGCGGCC AGCGATGTGA GCAAGAGCAC CCTGTTACCG
CAGGTTGGCG CGTTTGCCGA GGCCAACCAC ACAGATTTCG ACGCTGAGAA CGGCCCGGGA
GACAGCTACA AGTCATTCAA CTACGGCGTT CAACTGTCGC AACCGGTTTT CCGCGCCGAC
AACTGGTTCC GCTACGACGC CAGCCAGTTC CAGACCGAAG CCGCCCAGGC CCAGTACAAC
CTGGCCCAGC AACAACTGAT TCTGGATGTT GCAACCGCCT ATTTTAATGT CCTGCGCGCT
CAGGATACCG TTGCAACAGC TCGCGCGACT GAAGCAGCAA TCCAGCGCCA GTATGAACAG
GCGCAGGAAC GCTTCGATGT CGGCCTGATC GCCATCACCG AAGTGTACGA GGCCCGCGCC
AGCTATGACG ACAGCAAGAG CCAGCGCATT GCTGCAGAAA ACCAGTTGAA TGTCGCCCGC
GAGCAGCTGG CGCGACTGAC CGGCGAATAT GCTGAAGACC TGGAAAACCT GCGCGAGAAT
TTCCCGCTCG GTCGACCTGA ACCCATGAAC CCGAATGCCT GGGAGACAAC CGCTCTGGAC
CAGAACTGGT CTATTCAAGC GGCCCTGTCC CAACTGAACG CCAGCGAGGC TAATCTTAAA
GTTGCCAAAT CCGGCCATCT GCCAACAGTG GATCTGGTAG CCTCCTACGG CGAGTCTGAG
TTGGACGGAG CCCGGAACCC GCAGCAGGAG GGAACCCAGG GGGTTATTGG CCTCGAGCTG
AACGTGCCCC TCTACATGGG CGGCGGCACT CAAGCCGGCG TGCGCCAACA ACGCTCTCTG
GTTACCGCAG CCGAGCAGGA TCTGAACACC GTCCGTCGCG ATGTGCAGGT GAACACCCGC
AGCCTGTTCC TCACCGTGAA CAACAACGTG GAAACGGCAT CGGCCCTGGA ACAGACCATC
ATCTCCCGTC GCAGCGCACT GGATGCCACC CGGGCCGGTT ATGACGTTGG TACCCGCAAC
ATTGTGGAAG TGCTGGATGC CGAGCGGGCG TACTACGTTG CCCTTCGGGA TTACGCAAAT
GCACGGTATG ACTACGTGAT CAATACCCTG CAACTGAAAC AGGCAGCCGG AACCCTGAGC
CCCCAGGATC TGGTGGATCT GAACAACTGG CTGAGTGAAG GTGCCCGCGG CATAGAAGCC
ATGGCAGAAG AAGACCGGAC ACTGGACGAC CCTACTCAGT AA
|
|---|
| Protein sequence | MKKRLLPGLI TLLAAQPAFS LDLVEAYEQA LSYDSGIASA LAQFQAQQAA SDVSKSTLLP
QVGAFAEANH TDFDAENGPG DSYKSFNYGV QLSQPVFRAD NWFRYDASQF QTEAAQAQYN
LAQQQLILDV ATAYFNVLRA QDTVATARAT EAAIQRQYEQ AQERFDVGLI AITEVYEARA
SYDDSKSQRI AAENQLNVAR EQLARLTGEY AEDLENLREN FPLGRPEPMN PNAWETTALD
QNWSIQAALS QLNASEANLK VAKSGHLPTV DLVASYGESE LDGARNPQQE GTQGVIGLEL
NVPLYMGGGT QAGVRQQRSL VTAAEQDLNT VRRDVQVNTR SLFLTVNNNV ETASALEQTI
ISRRSALDAT RAGYDVGTRN IVEVLDAERA YYVALRDYAN ARYDYVINTL QLKQAAGTLS
PQDLVDLNNW LSEGARGIEA MAEEDRTLDD PTQ
|
|---|
| |