| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_0760 |
|---|
| Symbol | |
|---|
| ID | 4655616 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | + |
|---|
| Start bp | 859805 |
|---|
| End bp | 860275 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639810719 |
|---|
| Product | type II secretory pathway, pseudopilin PulG |
|---|
| Protein accession | YP_958044 |
|---|
| Protein GI | 120553693 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.014468 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGATGA CTGTGAATAA CATGTCCGTG CGTAAGGAAA AAGGTTTCAC CCTGATCGAA
CTGGTTATGG TGATCGTGAT TCTGGGGATT CTGGCTGCGT TTGCGTTGCC GCGGTTTGCG
GACCTGGGTG GAGACGCACG ACGTGCCACG CTTGAAGGTG CCGAGGGTGC CGTTAAGTCG
GCGGCGGCTA TCGCCCATTC TAAGTGGCTG GCGCAGGGGA GTACAGGTGA TGTTGAGATG
GAGGGTGCCG CGGCCGACAT TACCATGAGT CCTGATGGTT ATCCGACTTC TGATGATGCG
GGGATCGCCG AGGCGGCCCA GTTGGATTCA AACGATTACA CGGTAACCCC GGGTACGGAT
TCGGATACCG ATACTGCAAC GATTGAGGTG GCCGGCGCGT CCGGTACCTG TGAGTTCACA
TACAATCCAA CCACGGGGGC AACGGCTGGT TTTGATGCTT CCGGTTGCTG A
|
|---|
| Protein sequence | MMMTVNNMSV RKEKGFTLIE LVMVIVILGI LAAFALPRFA DLGGDARRAT LEGAEGAVKS
AAAIAHSKWL AQGSTGDVEM EGAAADITMS PDGYPTSDDA GIAEAAQLDS NDYTVTPGTD
SDTDTATIEV AGASGTCEFT YNPTTGATAG FDASGC
|
|---|
| |