| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_0747 |
|---|
| Symbol | |
|---|
| ID | 4655652 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | + |
|---|
| Start bp | 847231 |
|---|
| End bp | 848601 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639810706 |
|---|
| Product | major facilitator superfamily transporter |
|---|
| Protein accession | YP_958031 |
|---|
| Protein GI | 120553680 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.726619 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCGC TCGAAAAACG CTCAGTTGTG GCTCTGGCTT CGGTATACGC CATGCGTATG
CTGGGCCTGT TTATGGTCAT GCCCGTGTTT GTGCTGCTGG GTGCGGACCT GCAGGGTGCG
ACGCCAGCGC TATTGGGCCT GGCGATTGGT GCTTACGGCC TGAGTCAGGC GCTGCTTCAG
ATCCCCTTCG GCCTGTTGTC GGATCGGGTT GGCCGCAAGA AGATGATCTA CCTGGGGCTT
ATTCTGTTTG CCAGCGGGAG CCTGCTGGCC GCGTCGACCG ACTCAATATA CGTTGTGATC
GCCGGTCGGA TTCTTCAAGG TGCCGGTGCC ATCGCCAGTG TATTGATGGC ACTGCTGTCA
GACCTCACCC GAGAGGAAGA GCGCACCAAG GCCATGGCCA CGGTGGGCAT TTCCATTGGC
CTGTCGTTTT CCGTGTCGCT GGTGCTGGGC CCGTTGCTGG GCGCGGCCTG GGGCTTGTCT
GGCATCTTCT ACGTGACGGC AGTGATGGCC CTGTTGGCCC TTGTTGTGGT CGCCAGGGTG
GTGCCTACGC CACATACCCA TAAAGTCAGC GCCGATACCC ATCCTGCCCG CGAAATGGTC
GGGCGCGTTC TGGCCGATGG CCGCCTGCTG CGGCTCGACT TCGGAATCTT TGTGCTGCAC
CTGGTTCTGA CGGCCCTGTT CCTGGTCTTT CCGACCATGC TTCAGGATCA GTTGGGATTG
GCCAGCAGCT CCCACTGGTG GTTCTATTTG AGTGTGATGG TGCTTTCTTT CTTTGCCATG
GTGCCCTTTA TCATCATTGG CGAAAAGAAA CGCAAAATGA AGCCGATACT GTGCATGGCC
ATTGCCTTGC TGACAGCGGC AACAGCAACG CTGACTCAGG TGAATGCCAG CCTCTGGGCA
GCCTGGGGTG TGCTATTTTT CTTCTTTATG GCGTTCAATC TTCTGGAAGC CAGTCTGCCT
TCGTTAATCA GTAAAGAGGC TCCGGCTGCC AGTAAGGGAA CGGCCATGGG GGTTTATTCC
ACCTCCCAGT TTTTTGGTGC TTTTCTGGGT GGAGCTCTGG GAGGTTATCT GCTGCAGAGC
GCTGGCGTGG AGGGAGTGCT CTGGTTGATG GCCGGGTGCC TCCTGGTGTG GCTGCTGGCA
GCCTTGACCA TGCCGGCCCC GAGCTACACG ACCAGCCTGG TTCTGGAGCT GAGGGATGCG
CTGGAAAATA CCTTTGACGA CGTGGACCGT CAGCTACGAA GGCTGCCGGG CGTGAAGGAC
GTTGTGATTG TTGAAAATGC ATCGACAGCC TACCTGAAGG TGGACCGTCA GCATTTTCGG
GAAGATCAGC TTGCGGACTT TGACTTTGTC CGGCAGGGTA AGAGTACTTA A
|
|---|
| Protein sequence | MNALEKRSVV ALASVYAMRM LGLFMVMPVF VLLGADLQGA TPALLGLAIG AYGLSQALLQ
IPFGLLSDRV GRKKMIYLGL ILFASGSLLA ASTDSIYVVI AGRILQGAGA IASVLMALLS
DLTREEERTK AMATVGISIG LSFSVSLVLG PLLGAAWGLS GIFYVTAVMA LLALVVVARV
VPTPHTHKVS ADTHPAREMV GRVLADGRLL RLDFGIFVLH LVLTALFLVF PTMLQDQLGL
ASSSHWWFYL SVMVLSFFAM VPFIIIGEKK RKMKPILCMA IALLTAATAT LTQVNASLWA
AWGVLFFFFM AFNLLEASLP SLISKEAPAA SKGTAMGVYS TSQFFGAFLG GALGGYLLQS
AGVEGVLWLM AGCLLVWLLA ALTMPAPSYT TSLVLELRDA LENTFDDVDR QLRRLPGVKD
VVIVENASTA YLKVDRQHFR EDQLADFDFV RQGKST
|
|---|
| |