Gene Maqu_0734 details

Gene Information

• Locus tag: Maqu_0734
• Symbol: rplF
• ID: 4655639
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Marinobacter aquaeolei VT8
• Kingdom: Bacteria
• Replicon accession: NC_008740
• Strand: +
• Start bp: 837639
• End bp: 838172
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 639810693
• Product: 50S ribosomal protein L6
• Protein accession: YP_958018
• Protein GI: 120553667
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.000390696
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCAGGG TTGCCAATAA TCCTGTCGTG CTGCCTTCCG GTGTTGAGGT TAAGCTGAAC 
GGACAGGAAA TCAATGTGAA GGGTTCCAAA GGAGCGCTTC AGTTCACCAT TCACCAGGCG 
GTTGAAGTAA AGCAGGAAGA AAATGTCCTG CGTTTTGCGG CCCGCGATGG TGCAAAACAG 
TCCCGCGCTC TTGCTGGTAC TACTCGTGCG CTGGTTAACA ATATGGTTAC CGGCGTATCC 
ACAGGCTGGG AGCGTAAGCT GCAGCTGACG GGCGTAGGTT ACCGTGCGCA GGCGCAAGGT 
AAGAAGCTCA ACCTGACACT GGGTTTTTCC CACCCGGTCG AGTATGAGCT GCCCGAGGGT 
GTTACCGCTG AAACTCCGTC CAATACGGAA GTTGTGATTC GCGGTATCGA CAAGCAACAG 
GTTGGCCAGG TCGCTGCGGA AATCCGCGCG TTCCGTCCGC CCGAGCCGTA TAAAGGCAAG 
GGTGTGCGTT ATGCGGATGA GCAGGTCAGA CGCAAAGAAG CCAAGAAGAA ATAA 

 

Protein sequence

MSRVANNPVV LPSGVEVKLN GQEINVKGSK GALQFTIHQA VEVKQEENVL RFAARDGAKQ 
SRALAGTTRA LVNNMVTGVS TGWERKLQLT GVGYRAQAQG KKLNLTLGFS HPVEYELPEG 
VTAETPSNTE VVIRGIDKQQ VGQVAAEIRA FRPPEPYKGK GVRYADEQVR RKEAKKK