Gene Maqu_0568 details

Gene Information

• Locus tag: Maqu_0568
• ID: 4654206
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Marinobacter aquaeolei VT8
• Kingdom: Bacteria
• Replicon accession: NC_008740
• Strand: +
• Start bp: 651439
• End bp: 654714
• Gene Length: 3276 bp
• Protein Length: 1091 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 639810520
• Product: SMC domain-containing protein
• Protein accession: YP_957856
• Protein GI: 120553505
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0419] ATPase involved in DNA repair
• TIGRFAM ID: [TIGR00618] exonuclease SbcC

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.564542
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAATAC TGCAGGTACG CTTCAAAAAC CTGAACTCCC TGGTAGGCGA GTGGGAAATC 
GACCTGATGC ACCCGGCCTT CGCGTCTGAC GGCATCTTCG CCATTACTGG TCCGACTGGT 
GCGGGTAAGA CTACGATCCT CGATGCTATC TGCCTTGCCC TCTATGGGCG TACGCCTCGT 
CTGAACAAGG TTACCAAGAG CGGAAACGAA ATCATGTCCC GGCAGACCGG TGCATGTTTT 
GCCGAGGTGA CCTTCGAAAC CCAGAGTGGG CGTTACCGCT GTCATTGGAG CCAGCATCGG 
GCACGCAAGA AGCCGGATGG CGAGCTCCAG GCTCCGAAAC ATGAAATTGC CAATGCTGAT 
TCCGGCGAGA TTTTCGAATC CAAGATGAGA GGTGTAGCCG ACCAGATCGA GTCGGCTACT 
GGTATGGACT TTGATCGTTT TACCCGTTCC ATGTTGCTGG CCCAGGGGGG CTTCGCCGCG 
TTCCTTCAGG CGGCACCGGA TGATCGGGCT CCGATCCTGG AGCAGATCAC GGGCACAGAG 
ATCTACAGCC AGATATCCAT TCGCGTCCAT GAGCGACAGC GAGAAGAGCG AGAAAAGCTA 
AATTTACTGC AGGCTGAAAC AGCGGGCATC GTGATTCTCG AGCCGGAGCA GGAACAAGAG 
ATTGCGCAGA CACTCGATAC AAGGCAGAAG GAGGAAACAG ACCTCGCCGC CAAGTCCGCC 
GAGGCCGGAA AGGCCATTGC CTGGCTCTCC ATCATCGATG GATTAAAGAA GGAAATCGTC 
AATCTTGCCG ATGAGGAGAG CAAGCTGCAT GTTGATATCA GGGCGTTCAA GCCCGATCGT 
GAAAGGCTCA ACCGGGCTTT GAGTGCTTCC TCGCTTGATG GCGTATATGC AACGCTTATG 
GCCACCCGCA AACAGCAGGC AGATGACAGA GAGGCATTGA AAACTGAGGA AGAGGCGCTC 
CCTGGATTGG AATCCTCCGC CAAGGAGCAA GCCGAGACGA TGAGCACGGC TGAGCAACAA 
ACCGCTCGGG CCAAAGAAGA GCTGAAAGCG GCCGCACCGA TATTGCAAAA GGTTCGCTCC 
CTCGATCAGA AGCTTGCTGA TCAGGAAAAG GCAGTTACGG CGGGTGATGA GGCCTGCAAG 
AAGGATTCGG CAAAGATTGA CGCAGATACA CAAACCCGGC TCAAGGAACA GGAGAAGCGT 
ATTAAGGCCC AACAGGCATT GGAGCTTGTT GAAGGGTATC TCAAGGAGCA TGCCCGGGAT 
GAATGGCTGA TCGGCGGCCT GGCTGGTGTT GAAGAGCAGT TGAGAGGCCT GCTCTTTAGG 
CAAAGCGAAG CCCTTCAAAA AGAGAGCGAT CAAGAAACGG CCGAGAACGC TTTGAAACAG 
GCGACAACGT CACTCGACGA CTGTCAGAAG CAATCCGGCA TTCGGAAGCA GGAGCTGGAG 
GACGCATCAA AGCAGCTTCA GCAAGGCAAA GATGTTTTGA GCCAGCTACT GGGGGGGCGC 
TTGCTGCGCG AATATCGCAC GGAGAAGGAA ACTCTGCTGC GTGAAATGGC CTTCCTGACG 
AAAATAGCGG AGCTTGAAGA TCACCGGGCG AAACTTGAAG ACGGCAAGCC CTGCCCACTT 
TGTGGGGCCA CCGAGCATCC CTTCGCGGAA GGGAATGTTC CTGCCTCTGA TGAAACCGAA 
CAGAAGATTG AAGCGCTGAC CAAACTGATC AACAAAGCCG AGAATCAGGA AGCCGCTATC 
AAGAAACTCG AAGAAGCTGA AAGCTTGGCC CGTAAAAACC TGACGGCGGC TGAAAAGCTG 
GAGTCAGCGG CGGCTAATGA CAAAAAGGCA GCCGAAAGAA CACTTGCCGA GGTAAAAGGC 
AGCTTGGAAA AGCTCCGTGC AGACTTTGCC GAACGCAGGC ACGCCGTTTC CTCCAGGCTC 
CTGCCGCTTG GTATTGAGAA CATCCCTGAA ACGGACATTT CATCGCTGCT CGAGACCCTC 
AAAGCACGGC TGAAGGAATG GCAGGCCCAA GTCAAGAAGA AGGCAGACAT CGAGAAACAG 
GTTGCCGACC TCGACAGTGA GATCAAGAGG CTGGATGCGG TTATCGAAAC CCAAAGCACT 
GCCCTTGCCG AAAAACGGGA GCGCCTGGAA ACACTGAAAA CGGAATTTGC CGCAGGAAAT 
GATGAGCGCA AAGCACTTTA CGACGACAGG AATCCCGACG AAGAAGAGCG CGGTTTGAAT 
AAGGCGGTAT TTGACGCCGA AGGTGCCGAG AGGCAGGCCA GAGATCAGCA TAATCAACTA 
CAGCAAAGGT GGCATACCGC AAAGGCCCAT GTCGAATCCC TGAGAAAGCG GATCGACCAG 
CGAGAGCCGG AACTGGGAAG GATGGAAACT GATTTCTCCG AAGCACTTAC GCCAGTTGGT 
TTTTCAGATG AAGAACAGTT TCTGGGAGCC AGATTGACCT CTGAGCGGAG AGGTGAGCTG 
GCGGTTAAGG CCAATGAACT GGATGAGCGT CAAACAGATA TGAAAGCCAG GCAAAAGGAT 
CGGGAGACGC GCTTGGCCAC AGAGATGGCC CGAAAAGTGA CCGACAAATC TCTGGAAGAG 
CTCGAACCCC AATTCAAGGA GTACGAGGAG TCTCTGAGGG ATTTGCGGGA CATCATTGCC 
GGCCTCAAGC ACAAGCTGAG CGAAAATACG GCCGCCAAAG AGAGGATAAA AGAGAAACAA 
GCGGCTATTG AGGCCCAGGG CAAAGAGTGT CGCAGGTGGG AAAACCTGCA CGAATTGATC 
GGATCCGCAG ACGGTAAGAA GTATAGAAAC TTTGCCCAGG GGTTGACCTT CGAAATGATG 
ATTGGCCACG CCAACAGACA ATTGCAAAAA ATGACCGACC GCTACTTGCT GGTCCGTCAT 
GATGCTCAGC CCCTGGAGCT CAACGTGGTT GACAACTACC AGGCTGGGGA GATTCGGCCC 
ACGAAGAATC TTTCCGGTGG TGAAAGCTTT ATCGTCAGTC TCTCCCTGGC TCTGGGTCTG 
TCCCATATGG CCAGCAAGAA TGTCCGTGTG GACTCGCTGT TCCTGGATGA AGGCTTTGGC 
ACGCTGGACG ATGAAGCCCT TGATACTGCG TTGGAAACTC TCTCGGGTCT GCAGCAGGAC 
GGCAAGCTGA TCGGCGTTAT TTCACACGTG CCTGCCTTGA AGGAGCGTAT CAGCACGCAG 
ATCCAGGTTA CACCTCAAAC TGGCGGGAGA AGCCAGATAT CGGGGCCGGG ATGCAGCGGG 
TTGAGCGCTA CAGAGCAGGC CGTAGAGGCA GGTTAA 

 

Protein sequence

MRILQVRFKN LNSLVGEWEI DLMHPAFASD GIFAITGPTG AGKTTILDAI CLALYGRTPR 
LNKVTKSGNE IMSRQTGACF AEVTFETQSG RYRCHWSQHR ARKKPDGELQ APKHEIANAD 
SGEIFESKMR GVADQIESAT GMDFDRFTRS MLLAQGGFAA FLQAAPDDRA PILEQITGTE 
IYSQISIRVH ERQREEREKL NLLQAETAGI VILEPEQEQE IAQTLDTRQK EETDLAAKSA 
EAGKAIAWLS IIDGLKKEIV NLADEESKLH VDIRAFKPDR ERLNRALSAS SLDGVYATLM 
ATRKQQADDR EALKTEEEAL PGLESSAKEQ AETMSTAEQQ TARAKEELKA AAPILQKVRS 
LDQKLADQEK AVTAGDEACK KDSAKIDADT QTRLKEQEKR IKAQQALELV EGYLKEHARD 
EWLIGGLAGV EEQLRGLLFR QSEALQKESD QETAENALKQ ATTSLDDCQK QSGIRKQELE 
DASKQLQQGK DVLSQLLGGR LLREYRTEKE TLLREMAFLT KIAELEDHRA KLEDGKPCPL 
CGATEHPFAE GNVPASDETE QKIEALTKLI NKAENQEAAI KKLEEAESLA RKNLTAAEKL 
ESAAANDKKA AERTLAEVKG SLEKLRADFA ERRHAVSSRL LPLGIENIPE TDISSLLETL 
KARLKEWQAQ VKKKADIEKQ VADLDSEIKR LDAVIETQST ALAEKRERLE TLKTEFAAGN 
DERKALYDDR NPDEEERGLN KAVFDAEGAE RQARDQHNQL QQRWHTAKAH VESLRKRIDQ 
REPELGRMET DFSEALTPVG FSDEEQFLGA RLTSERRGEL AVKANELDER QTDMKARQKD 
RETRLATEMA RKVTDKSLEE LEPQFKEYEE SLRDLRDIIA GLKHKLSENT AAKERIKEKQ 
AAIEAQGKEC RRWENLHELI GSADGKKYRN FAQGLTFEMM IGHANRQLQK MTDRYLLVRH 
DAQPLELNVV DNYQAGEIRP TKNLSGGESF IVSLSLALGL SHMASKNVRV DSLFLDEGFG 
TLDDEALDTA LETLSGLQQD GKLIGVISHV PALKERISTQ IQVTPQTGGR SQISGPGCSG 
LSATEQAVEA G