| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_0518 |
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| Symbol | |
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| ID | 4656216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinobacter aquaeolei VT8 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008740 |
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| Strand | - |
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| Start bp | 590600 |
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| End bp | 591247 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639810470 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_957806 |
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| Protein GI | 120553455 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00604646 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGACCA TAGCCAGCTC AAATACGATA ACTGTCAAGG AGCGCCCGGT GACAACACTG
GAGCAGCAAC CAACGAAAAC CGAAGGGCGC AAAGACCCCT GGGGTGTTTT GTTGGAAAAA
GTCGGCAAGC ATCAGGATCG GGCGGCTTAT CATGCTTTGT TCGAGCACTT TGCCCCGCAG
ATCAAGTACT ACGCAATCTC GAACGGGCTG GCCAGCCACG CGGAAGAGCT GGTGCAGGAA
GTCTTCGTCT CTATCTGGCG TCGCTCTTGT CTTTACGACT GGCGCAAGGC GGCCGCTTCC
ACCTGGATTT TCACCATTGC CCGGAACCAG CGCATTGATA TGCTGCGCAA AATGCAGCGC
ACCAGTGCTG AGATGGCGGT GGAAACCGAG GATCTCTGGC AGATCCCGGG TGATAACGAA
GACGAACCAG TCACCTCCCT GCATCGCCTG ATGTCCGAGC GGCGCATCCG GGAGTCGCTG
AGCCAGCTCC CGGAAGAGCA GATTACCGTC ATTGCCAAGG TATATATGGA GCACAAATCC
CACCAGATGG TGGCAGATGA GCTCAACATT CCTCTCGGCA CCGTGAAAAG CCGGGTTCGC
CTGGCACTGA ACAAACTGAA AGTGATTTTG CAGGATCAAA ACGTATGA
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| Protein sequence | MMTIASSNTI TVKERPVTTL EQQPTKTEGR KDPWGVLLEK VGKHQDRAAY HALFEHFAPQ
IKYYAISNGL ASHAEELVQE VFVSIWRRSC LYDWRKAAAS TWIFTIARNQ RIDMLRKMQR
TSAEMAVETE DLWQIPGDNE DEPVTSLHRL MSERRIRESL SQLPEEQITV IAKVYMEHKS
HQMVADELNI PLGTVKSRVR LALNKLKVIL QDQNV
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