| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_0452 |
|---|
| Symbol | |
|---|
| ID | 4657421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | + |
|---|
| Start bp | 515930 |
|---|
| End bp | 516928 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639810404 |
|---|
| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
|---|
| Protein accession | YP_957740 |
|---|
| Protein GI | 120553389 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.115237 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTGT TGGAAGTAAA AGATCTGGAT GTGCGCTTCG CGGTGCGTGG CGGAGACCTG
ACGGCCCTGC GCGGTATCAG CTTCAGCCTG GACAAAGGCG AGCGGCTGGG CCTGGTGGGC
GAATCCGGCG CCGGCAAGTC GGTGGCGGCT TTCTCCATCC TCAACCTGAT CGCCCGGCCG
GGCTACATTG CCGGCGGGCA GATCCTGTTT GAAGGGAAAG ACCTGGCAGC CATGAGCGAG
CGCGAGTTGC GGAAGATTCG TGGCAACCGC ATCGCCATGA TCTTCCAGGA CCCGATGATG
ACCCTGAATC CGGTGCTCAC CATCGGTACC CAGATGGTGG AGGCTATCCT GGCGCACCGG
AAGATCAGCA AGAAAGAGGC GAGGGCCATT GCCCTGGATC GTCTGCAGAA GGTGCAGATT
CCGTCGCCGG AAAAACGACT GGATCAGTAT CCCCATGAAC TGTCCGGCGG TATGCGCCAG
CGGGTGATCA TTGCCATTGC CCTGCTGCTG GACCCGGAAA TCATCATTGC GGATGAACCC
ACCACCGCCC TGGATGTGAC CATTCAGGCG GAGATCATGG ATTTGCTGCT GAACCTGTGC
GAGCAGGAGA ACGTGGCGCT GATGCTGATT ACCCACGATC TCGGTGTGGT CTCGCAGGTG
ACCCAGCGCA TGCTGGTGAT GTACTCCGGC CGGATCATCG AGCAGGGCCC GACCCGGGAA
ATCATCAACG ACGCCCAGCA TCCCTACACC CAGGGGCTGA TCAACGCGCT GCCCCAGATG
GGGGAGCCGG GTGCGCGGCT GTTCCAGATT CCCGGCTCCA TGCCGTCCCT GAAAAATGTG
CCGTCCGGTT GCCCGTTCCA CCCCCGTTGC AACTTCGCCA CCGAGCAGTG CAAGCGCGCC
ATGCCGGAGT ATGTGCGCTC GGGCAATGTC GATGTCGCCT GTTACGAAGT TGCCAACCTG
ATTGAGCAGG AGAAACGCAT GCAGGAGGCG GAATCATGA
|
|---|
| Protein sequence | MALLEVKDLD VRFAVRGGDL TALRGISFSL DKGERLGLVG ESGAGKSVAA FSILNLIARP
GYIAGGQILF EGKDLAAMSE RELRKIRGNR IAMIFQDPMM TLNPVLTIGT QMVEAILAHR
KISKKEARAI ALDRLQKVQI PSPEKRLDQY PHELSGGMRQ RVIIAIALLL DPEIIIADEP
TTALDVTIQA EIMDLLLNLC EQENVALMLI THDLGVVSQV TQRMLVMYSG RIIEQGPTRE
IINDAQHPYT QGLINALPQM GEPGARLFQI PGSMPSLKNV PSGCPFHPRC NFATEQCKRA
MPEYVRSGNV DVACYEVANL IEQEKRMQEA ES
|
|---|
| |