| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_0298 |
|---|
| Symbol | |
|---|
| ID | 4653760 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | - |
|---|
| Start bp | 344187 |
|---|
| End bp | 346316 |
|---|
| Gene Length | 2130 bp |
|---|
| Protein Length | 709 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639810254 |
|---|
| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
|---|
| Protein accession | YP_957591 |
|---|
| Protein GI | 120553240 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAACA CCCCGGACTC TCCCCAGCCT GCTTCGGATA TCGATCCGAA ACGACTGGCC
CTGGTCGCCA CCGCCAGCCG TAACATGGCA CTGATACTGG ATGCCGGCGG CTGCATCGAA
TGGGTCAACC AGGCGTTCGA GGAGCATACT GGCTACTCGC TGAGTGCAGT ACGTGGAAAG
CTTCCCAGCC AGGTTCTGGC CGGGCCGGAC ACGGATCCTG ATACCGTCAG CCGGATATAC
CGCCACCTGT TCCGGGGCGA GGCGTTTGAA GAAGACATCC TGCACTATAC CGCCAGCGGC
GAACCCTACT GGGTACACAC CTACTGCACA CCGGTGGATG GCGCGGACGG CGTTGAACCC
GGCTTCGTGG TGATCCAGAC CAACATTTCT GACCGGAAAA ACAGTGAACG CGGCCTGCGC
ATCGCTGCCA GCGTCTTTGA TCGCAGTCAC GAGGCGATTG TCATCACCGA TCACCTCAAC
CACATTATCG ATGTAAACCC TGCGTTTTCC CGGATTACCG GCTACAGCCG TCAGGAAGTA
CTCGGCCTCA ACCCTTCCAT TCTGAGCTCT GGCCGCCATT CCCGGGAATA CTACCGTTCC
ATGTGGCAGT CCATCGAAAA GACCGACCAC TGGCGCGGAG AGGTGTGGAA TCGCCGCAAA
AACGGTGAGG AATATGTGGA ACTGCTATCC ATCAGCCGGG TGCACCTGGA AGAACCCGGC
AAACATTATT ATGTGGCGGC GTTCTCCGAT ATCACCGCCC TGAAGAATCA CGCCAAAGAG
CTCGACCGGG CCGCGAATTA CGACGACCTC ACCGGTCTGC CCAACCGACA GCTGCTGGAA
GAGCGGTTGC GATCCGCCAA GGCGCACGCG GACCGGCAGA AACGCTCACT CGCCATCTGC
TATCTTGACC TGGACGGATT CAAGGGCATC AACGATGAAC TCGGCCACGA TTTCGGCGAC
GAGGCCCTCC GCATGGTGGC GGAACGGCTC ACCCGAAGTC TACGCAGCGG AGATACCGTC
GCCCGGATCG GCGGCGATGA ATTTGTTCTG CTGATTCAGG GTGATCATTC CGAACCCCTG
TATCAACGTA TTCTGACGTC GGTCAGCGAG CCATTCGAAC TGGCGGACAA AGAGGTAAAC
CTGACCGCCA GCCTGGGCGT CACCCTGTAC CCGGAAGATG ATACCGACGC CGAAGGGCTG
GTCCGGCACG CCGACCAGGC CATGTACGCT GCCAAAGAGA AAGGCCGCAA CCAATTCCAT
ATTTTTGATC CCGGCCAGTA TGCTTTCCGC AAGGAACGCA GGAACCAGCT GATGGAGATT
TCCCGGGCCC TGGAAAACGA GGAATTCGAA CTCTACTTCC AACCCCAGCT GCGCATGGCG
GACTGCCAGG TGATTGCCTT TGAGGCCCTG ATCCGCTGGA ACCACCCGGA AAAGGGACTG
ATTGCCCCCG GCGCCTTTCT GCCGGCGGTG GCCAACAGTC ACCTAGAGAT CCCCCTGGGC
CAATGGGTAC TGAAAGAAGC GATTCACCAG ATGAACCGGT GGCGGGAAGC CGGCGAAGCC
CTGGCCGTCA GCATCAACAT CAGTGCGCCC CACCTGATGG ACCGGAAGTT TGTGGACTAC
CTGGAAGGCT ATCTGCAAAG CCATCCGGAA GTGAGCCCCG GGCAAATCAC CCTGGAAGTG
CTTGAGTCCA CGGCGCTGGA GGACACCAAG CGCGCCAGCA ATGTTCTGGC CCGCTGCCAG
TCTCTGGGCC TGCAGGTGGC ACTGGATGAC TTTGGCACCG GGTTTTCATC GCTAACCTAC
CTGCGCACCC TGCCGGTGGA TGTCATCAAG ATTGATCAGA GTTTTGTCCG CAACATGCTC
ACCGACGCCA ATGACCGCGC CATCGTCGAA AGCGTGATCT TCCTGGCTCA GCGCTTTGAC
CATCCTGTGC TGGCGGAAGG CGTGGAGACC ATGGATCATG CCGCCGCATT GCGGGACATG
GGCTGCAACC TGGTCCAGGG CTACGGCATC GCCCGCCCGA TGCCATCCGG AGCGGTACTG
GAGTGGCTGC AACACTGGCG ACGCCAGATC GAGTCCCGAA AGGAAATCCA GCAACTGCAG
GCGGTTTCCG AACAGGGCGA GGGCATCTGA
|
|---|
| Protein sequence | MPNTPDSPQP ASDIDPKRLA LVATASRNMA LILDAGGCIE WVNQAFEEHT GYSLSAVRGK
LPSQVLAGPD TDPDTVSRIY RHLFRGEAFE EDILHYTASG EPYWVHTYCT PVDGADGVEP
GFVVIQTNIS DRKNSERGLR IAASVFDRSH EAIVITDHLN HIIDVNPAFS RITGYSRQEV
LGLNPSILSS GRHSREYYRS MWQSIEKTDH WRGEVWNRRK NGEEYVELLS ISRVHLEEPG
KHYYVAAFSD ITALKNHAKE LDRAANYDDL TGLPNRQLLE ERLRSAKAHA DRQKRSLAIC
YLDLDGFKGI NDELGHDFGD EALRMVAERL TRSLRSGDTV ARIGGDEFVL LIQGDHSEPL
YQRILTSVSE PFELADKEVN LTASLGVTLY PEDDTDAEGL VRHADQAMYA AKEKGRNQFH
IFDPGQYAFR KERRNQLMEI SRALENEEFE LYFQPQLRMA DCQVIAFEAL IRWNHPEKGL
IAPGAFLPAV ANSHLEIPLG QWVLKEAIHQ MNRWREAGEA LAVSINISAP HLMDRKFVDY
LEGYLQSHPE VSPGQITLEV LESTALEDTK RASNVLARCQ SLGLQVALDD FGTGFSSLTY
LRTLPVDVIK IDQSFVRNML TDANDRAIVE SVIFLAQRFD HPVLAEGVET MDHAAALRDM
GCNLVQGYGI ARPMPSGAVL EWLQHWRRQI ESRKEIQQLQ AVSEQGEGI
|
|---|
| |