| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_0228 |
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| Symbol | |
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| ID | 4656646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinobacter aquaeolei VT8 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008740 |
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| Strand | + |
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| Start bp | 264079 |
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| End bp | 267189 |
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| Gene Length | 3111 bp |
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| Protein Length | 1036 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 639810184 |
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| Product | cold-shock DNA-binding domain-containing protein |
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| Protein accession | YP_957521 |
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| Protein GI | 120553170 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCTGA GCGACGCACT GATTGAAAAG ATCAAAAAAG GAAAAGTTGT CTTGTTTTTG
GGCTCTGGCG CTCTATTTGG TGCAGACCTA CCAGACAAAA AAATTCCTCT TGGTAATGAC
CTTCGGGATA TTCTTTGCGA CAGATTTCTA AACGAAAGCT TCAAAGACGC TGATTTAGCT
CACGTTGCTG CGATGGCGAT CTCGCAAACT AGCCTTTTTG AAGTGCAAGA TTATATTCGA
GATTATTTTT CAGATTTGCG ACCAGCTCAA TTTCACCTGA AGATCCCGAA TTTTCGATGG
AGAGCAATAT TCACAACAAA TTACGACATG TTGGTTGAAC GTTGCTATAC CCTGAACAGA
GATCCGATGC AGTCGCTTTC GATAATTATT AGTAATGAAG ATAATTTTGA CGAGACGCGA
GTTACAAATG ACTTATTGCC TTACGTTAAG TTACATGGGT GCTTGACAAG AACTCACGAC
TCATCGTTAC CGCTGGTGTT GACCACAGAT CAATATAACG AAAGTTTTGA TGTTAGGAAG
AGGCTTTTTA ATCATTTATA TGAATTAGCA TATGATAACT CGATCGTTTT CGTAGGGCAT
AGTCTACTAG ATCATAATGT AAGATCAGTG CTTCTGGACC TTGAAAAAGA GTGTAAGGGC
GGGCAAAGGC ATTTCTTAAT AAAGCCAAAC GTAGATGAAA TTGAAAAAGA ATTCTGGGCA
CATAAAAAGA TCACTGCTTT AGATATTACA TTCTCCGATT TCCTCGATGA GATTGATGAT
AGAATATCAA AAGTAGACCG ATTGCTTTCG GTCATAACTC CCCCATCAAC GCATCCAATT
CAGGCTGTTT TCAATAAACA TGTTTCTCCC TCAGATGAGC TTATTGATTT TTTGACAAAC
CAGGTCGACT GGGTGAATCC CGACATTCCC ACATTGGGAT CTGATCCTTT GGAGTTCTTC
AAGGGCGTTG ACCAAGGATG GGACCCGGTC GCGCAAGAGA TTGCGATTCC GCGGAATTTA
GCACAAAACA TCAACGATCT TGCGATTGAA AAGCCAGAAG CTAGTCGGGA TGAAAAACAT
GAATTCTATG TCGTCAAAGG TGAAGCGGGA TCAGGTAAAA CTATACTTCT TCGTCAAATA
GCTTGGGATG TGGGGGTCTC ACGCCTGGGA ATCGCTCTAT GGGTTAAACC TGGATGTTTT
GCTGATTTAG ACATTATCGA GGAGATAATT GAGAAAACTG GTGAGAAGGT CTATTTGTTC
TGGGATGATG CCGCCGTAAA CGCTATTGAA TTAAATAGAT TTTTACAAAA GCTCGACAGG
AAAGAATTGC CGGTGACCGT TTTCACCGCT GAACGGTATA ATGAGTGGAA TACTCGATGT
GAAGATCTTG ACGAATTAGT CTCGGATAAA TTCGAGCTTA GATATCTTGC TGAGAATGAG
ATCGATTTAT TAGTGCATCG ATTGGAGACG TATTCATCGT TGGGGCCAAA TTTAAAAAAT
AAAACTCACG AGGAGAGATG TCACGAGTTT CGTGAAATTT ATGGTCGCCA GCTTCTAGTT
GCATTACATG AGGCGACAAT GGGGGAGCCG TTCGAGGACA TAATATCCGA CGAGTATGAA
AATATTTACC CCGAAGCTGC TAAGAGAATT TATCTAACTG TTTGCGTTCT CAATAGACTG
CGAATACCAG TTCGAGCAGG GCTGATATCG AGAATTCACG AGATTTCCTT CTCCCAGTTT
CAGAATGAAT TCTACAAGCC GCTCGAGAAG GTCGTAATTA TATCCGGCAG CGGCGAGCAG
GATATTCATT ACCAAGCGAG ACATTCTGAA ATCGCAGAAA TTGTCTTCCG ACGAGCTTTA
GCTAATGCAG AAGATCGGTA CCAAGAATAT ATAAATATTG TGAAAAAGCT GAACGTTTCG
TTCAGTACTG ATCGATCCTC CCAGCGCTCT TTACTTAGGG CGAAGTCGCT TCATGAACTA
TTCCCTCAGT ATGAAGACGT CACTGCGATT TATGCGCATG CTCTTGAATC AAATGGAACA
GATCCGTATA TCCTTCAGCA GCAGGCCAAC TATGAGCGTA TTCGACCGAA TGGAAGCTTT
GACGAAGCCC TTCGTTTGCT TGAGCAAGCA AAAGAATTGG CCCCCTATGA TTCCAGTATC
CTCCATAGCT TGTCAGTTGT ATGGCGCGAC AAGTCGACGA ACGAGGATGA TCAGAGGTTG
CGCAGAAAAT ACAGAGCGGA AGCTAGAGGA TATCTTAATC AAATGATCAC CAAGTGGGGG
GTCGATGGCT ATACCTCGTC TTCACTCATT GAGCTTTCTA TCGAAGCCTT GAATGACCTC
CTAAATGACG ACGCAGCAAC GGAATTCAGT ATAAGGGAAG CAATTCGATC GGTTCAGCAA
GAGATAACAG ATAACAAGAG GAAATTCCCG TCGGAAAAAC AAGTCCATGT CCTCGAAGCT
CGGTTTTCTG AGCTGATTGA TGATCACAGA ACAGCGCTAA CCGCCTTGGA AAAATCTTTC
GAAGAGAGTG ACAGAGAGCC TCATCTTGCG ATACGGCTGG CAAGTCTGTT GGTTGCAGAA
GCGAATTTTG ATAAAGCCGA AGAGGTCTTT AAGCAAGCAC TCGAGAGACG TCGAGCGGAT
CATAAACTGA ACTTTCATTA TGCTGAATTC TTGCGGAATA ATTCAAAACC TTCACATGAA
GACTTGATGT ACTTTTACCG CAGGGCATTT ACACCCGGAG ACGGGAATTA CCAAGCGCAG
TTCTGGTACG CAAGGTACGC GTTTAATCTA AGCGACGCAA AGATTCAGCA AGAAGTAAAA
GGCATCTTCG AAGGGCTCAG AAAGGCGAGA CTACCTCATG CGGCGAAGGT CGAAATTCGA
GACTTTGAGA CTGCTGGAAC TGAGCGAAAA CGTTTTACCG GCACGATAAA GACGAAGAGA
TCAACCTTTG GCTTCGTTAA GGTGGATGGT CGTGGTGATG AGGTGTTGTT CCCTGCTTCG
TCAGTTGAGG ATGGCTTGTG GGATGCCATG ATAGAGGGTG ACAGGGTCTC TTTTTCGCTT
GGATACAGTT TCAACGGACC AGTTGCCTGC CAGATATCCT GCGACAAATG A
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| Protein sequence | MALSDALIEK IKKGKVVLFL GSGALFGADL PDKKIPLGND LRDILCDRFL NESFKDADLA
HVAAMAISQT SLFEVQDYIR DYFSDLRPAQ FHLKIPNFRW RAIFTTNYDM LVERCYTLNR
DPMQSLSIII SNEDNFDETR VTNDLLPYVK LHGCLTRTHD SSLPLVLTTD QYNESFDVRK
RLFNHLYELA YDNSIVFVGH SLLDHNVRSV LLDLEKECKG GQRHFLIKPN VDEIEKEFWA
HKKITALDIT FSDFLDEIDD RISKVDRLLS VITPPSTHPI QAVFNKHVSP SDELIDFLTN
QVDWVNPDIP TLGSDPLEFF KGVDQGWDPV AQEIAIPRNL AQNINDLAIE KPEASRDEKH
EFYVVKGEAG SGKTILLRQI AWDVGVSRLG IALWVKPGCF ADLDIIEEII EKTGEKVYLF
WDDAAVNAIE LNRFLQKLDR KELPVTVFTA ERYNEWNTRC EDLDELVSDK FELRYLAENE
IDLLVHRLET YSSLGPNLKN KTHEERCHEF REIYGRQLLV ALHEATMGEP FEDIISDEYE
NIYPEAAKRI YLTVCVLNRL RIPVRAGLIS RIHEISFSQF QNEFYKPLEK VVIISGSGEQ
DIHYQARHSE IAEIVFRRAL ANAEDRYQEY INIVKKLNVS FSTDRSSQRS LLRAKSLHEL
FPQYEDVTAI YAHALESNGT DPYILQQQAN YERIRPNGSF DEALRLLEQA KELAPYDSSI
LHSLSVVWRD KSTNEDDQRL RRKYRAEARG YLNQMITKWG VDGYTSSSLI ELSIEALNDL
LNDDAATEFS IREAIRSVQQ EITDNKRKFP SEKQVHVLEA RFSELIDDHR TALTALEKSF
EESDREPHLA IRLASLLVAE ANFDKAEEVF KQALERRRAD HKLNFHYAEF LRNNSKPSHE
DLMYFYRRAF TPGDGNYQAQ FWYARYAFNL SDAKIQQEVK GIFEGLRKAR LPHAAKVEIR
DFETAGTERK RFTGTIKTKR STFGFVKVDG RGDEVLFPAS SVEDGLWDAM IEGDRVSFSL
GYSFNGPVAC QISCDK
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