| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_0158 |
|---|
| Symbol | |
|---|
| ID | 4655156 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | + |
|---|
| Start bp | 189464 |
|---|
| End bp | 190279 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639810115 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_957452 |
|---|
| Protein GI | 120553101 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.722445 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGATC TGAACAACAA GGTGGCTGTC GTCACTGGTG CTGGCTCTGG TATCGGCCGA
TCCCTGGCCA AATCCCTTGC GACCCGGGGC TGTCGGCTGG CTCTTTCCGA TGTTAACGAA
GCGGGGCTGG CGGAAACCGC AGCCGGACTG GACGGTGCCG AGGTGAAAAC CTACCGCCTG
GATGTCTCCG ACCGGGACGC CATCTACGCC CACGCCGCGC AGGTCCGCAA GGAATTTGGT
CAGGTTAACC TGATTATCAA CAACGCCGGT GTGGCCCTCT CTGCCACGGT GCGGGAAATG
ACCGACGCCG ATTTCAAGTG GGTGATGGAC ATTGATTTCT GGGGCGTTGC CCATGGTACC
CGGGCGTTTC TGCCGTACCT GATTGAATCC GGCGATGGTC ATGTGGTGAA CATCTCCAGT
GTGTTTGGCC TGATCGGAGT GCCCAAGCAA AGCGCCTACA ATGCTGCCAA GTTTGCGGTG
CGTGGGTTTA CCGAGTCCCT GCGCCAGGAA ATGAAACTGG AGAATCAGCC GGTTCAGGTC
AGCTGTGTGC ACCCTGGTGG CATCCGCACC AACATTGCCA ATGCCGCGCG CATGGGCAAA
TCCGAAAACG CCGAGGCCCA GCGCAAGGGC TTCGACAAGC TGGCCATGAC CACTCCGGAC
AAGGCGGCTG AAATTATTGT CAAAGGCATC CTCAAAAACG AATCCCGTAT TCTGGTGGGG
CCGGATGCCT GGGGCATTGA CGCCATCAAT CGGTTGCTGG GCTCGGCCTA TCAACCGTTG
GTGGAACGGT TTTCCCGCAA GAATCTGTAT ATCTGA
|
|---|
| Protein sequence | MKDLNNKVAV VTGAGSGIGR SLAKSLATRG CRLALSDVNE AGLAETAAGL DGAEVKTYRL
DVSDRDAIYA HAAQVRKEFG QVNLIINNAG VALSATVREM TDADFKWVMD IDFWGVAHGT
RAFLPYLIES GDGHVVNISS VFGLIGVPKQ SAYNAAKFAV RGFTESLRQE MKLENQPVQV
SCVHPGGIRT NIANAARMGK SENAEAQRKG FDKLAMTTPD KAAEIIVKGI LKNESRILVG
PDAWGIDAIN RLLGSAYQPL VERFSRKNLY I
|
|---|
| |