| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_0044 |
|---|
| Symbol | |
|---|
| ID | 4656255 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | + |
|---|
| Start bp | 66118 |
|---|
| End bp | 67134 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639810000 |
|---|
| Product | peptidoglycan-binding LysM |
|---|
| Protein accession | YP_957338 |
|---|
| Protein GI | 120552987 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGAAAC TGTTGTACGC TCTGGCAGCC TCTGCGCTGC TGTTTACCTC CTGGGCCCAG
GCACAGCCGG AGCTGAGGTC TGATCATCCT GAGCGTTACA CTGTCGTCAA AGGGGATACC
CTCTGGGACA TTTCAGCGCG ATTCCTGAAC AACCCGTGGT ACTGGCCGGA AATCTGGCAC
GTGAACCCGC AGGTTGCCAA CCCCCACCTG ATCTATCCCG GTGACCGCCT GGCACTGGTG
TACATCGATG GCAAGCCCCG GATTACCAAG GTCGCGACCA GCGATGTGGT GAAGCTCTCG
CCCCAGGTTC GTTCCGAGGC CATCGACACA CCAATACCGG CCATCCCCCT GGATGCCATC
GCCAGTTTCC TGACCGAAAC CCGTATTGTC AGCCCGGAAG AAATCAACGG TGCGCCCTAT
GTGCTTGAAG GTGAGGACGG CCGCATCATC ACCGGTGCCG GTGACCGTAT TTACGCTCGC
GGCGAGAAGC CGGCCGATCG CGTGGGTATT TTCCGTCGCA GCAAGGAATT TGTGGATCCG
GACACCGGCG AGTTCCTTGG CCTGGAAGCC CGGAGCATTG CCCGCGGTAA CGTTAATGCC
GAAAACGGTG ATGTGCTGAC CGTAGGCATT ACCAAGTCCA GTGAAGAAGT GCGTATTGGC
GACCGGTTGC TGGTGAATGA AGACCGCCGG CTGACCACCA GCTTCGTGCC CAGCTCGCCG
GATAGTGAGA TCGAAGGCAA GATGATTTCT GTCGATGGCG GTGTCAGCCA GATCGGTCAG
TACGATGTGG TCGCCATTAA CCGTGGTGAG CGCGAAGGCC TGGCGCCCGG TAATGTGCTG
GCGGTGCTGA AGGCGGGCAA CATGGTTCGT GATCCGGTCA CCGGCGAAAC CATTGAATTG
CCGTCTGAGC GGGCTGGCCT GCTGATGGTG TTCCAGGCCT ATGAGAAAAT GAGCTACGGT
CTGGTGCTGC AGGCAACGCG GCCCCTCTCG GTGGGTGACA AGGTCACCAA TCCCTGA
|
|---|
| Protein sequence | MRKLLYALAA SALLFTSWAQ AQPELRSDHP ERYTVVKGDT LWDISARFLN NPWYWPEIWH
VNPQVANPHL IYPGDRLALV YIDGKPRITK VATSDVVKLS PQVRSEAIDT PIPAIPLDAI
ASFLTETRIV SPEEINGAPY VLEGEDGRII TGAGDRIYAR GEKPADRVGI FRRSKEFVDP
DTGEFLGLEA RSIARGNVNA ENGDVLTVGI TKSSEEVRIG DRLLVNEDRR LTTSFVPSSP
DSEIEGKMIS VDGGVSQIGQ YDVVAINRGE REGLAPGNVL AVLKAGNMVR DPVTGETIEL
PSERAGLLMV FQAYEKMSYG LVLQATRPLS VGDKVTNP
|
|---|
| |