| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_0019 |
|---|
| Symbol | |
|---|
| ID | 4654711 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | + |
|---|
| Start bp | 33147 |
|---|
| End bp | 34268 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639809975 |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_957314 |
|---|
| Protein GI | 120552963 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCCT TACGCAACAT CTGGCACCTG GGTATCAAGG AACTGCGCAG TCTGTGGCAG
GACAAGGCAT TGATGGTGTT TGTGCTGGTG GCGTTTACGG TGATGATCTA CACCGCAGGT
TCCGCTGGCT CCATGGAGCT TCACAACGCA CCGATCGCCG TGGTGGACGA AGATCAGACG
GTGTTGTCTG GTCGCATCAT CAATTCGCTC CAGCAGCCAT GGTTCCTGAC GCCGGATCTG
GTGGCCTACG GTGACATTGA CGACTTGCTG GACAAGGGCA GCCATACCTT TGCCCTGGTG
ATCCCCGAAA GCTTTGAGCG GGATGTCCGG CAGGGCAACC CGGTAGCGTT GCAGCTGAAC
ATCGACGCCA CCCGCATGAG CCAGGCCTTT ATAGGCACCA ATTACATTCA GCGCTTTGCG
ATGGCGGAAG TGGCGGAGTT TCTGCAACCG GGTAGCTCTG CCAGCACCGG GCTACCGATC
GAGCTGGTCA CCCGGGTGAG TTACAACCCC AACCTGGACG GAACCTGGTT TGGCGGTGTC
ATGGAGCTGA TCACCCAGGT GACCCTGATC AGCATCATTC TTACCGGGGC GGCACTGATC
CGGGAGCGGG AGCACGGCAC GGTGGAGCAT CTGATGGTGA TGCCGTTGCG GCCTTTTGAA
ATCATGGCGT CCAAGGTGTG GGCCAATGGT CTGGTGGTGT TACTGGCAGC GGCGCTGTCG
GTAACGCTGG TGATCCAGCG CTGGCTACAG GTGCCGGTGG CAGGGTCGGT GTTGCTGTTT
CTGCTCGGCG CCCTGATTCA CCTGTTTTCC ACCACCGCGA TTGGCATTCT GATCGGCACC
GTGGCCCGAA CCATGCCCCA GTTTGGCCTG CTGCTGATTC TCACCATCCT GCCCTTGCAG
CTGCTGTCGG GCGGTATCAC GCCCCGGGAA AGCATGCCCC AGCTGGTGCA GGACCTGATG
TTGGCGGCGC CCACCACCCA CTTTGTCAGC ATGGCCCAGG CCATTCTGTA CCGGGGTGCG
GGGCTGGAGG TGGTGTGGCC ACAGATGCTG GCCCTGATGG CCATTGGCGG GCTGTTTTTC
ACGGCGGCGT TGCTGTTATT CCGCCGCCAC CTCTCGGTGT AA
|
|---|
| Protein sequence | MNSLRNIWHL GIKELRSLWQ DKALMVFVLV AFTVMIYTAG SAGSMELHNA PIAVVDEDQT
VLSGRIINSL QQPWFLTPDL VAYGDIDDLL DKGSHTFALV IPESFERDVR QGNPVALQLN
IDATRMSQAF IGTNYIQRFA MAEVAEFLQP GSSASTGLPI ELVTRVSYNP NLDGTWFGGV
MELITQVTLI SIILTGAALI REREHGTVEH LMVMPLRPFE IMASKVWANG LVVLLAAALS
VTLVIQRWLQ VPVAGSVLLF LLGALIHLFS TTAIGILIGT VARTMPQFGL LLILTILPLQ
LLSGGITPRE SMPQLVQDLM LAAPTTHFVS MAQAILYRGA GLEVVWPQML ALMAIGGLFF
TAALLLFRRH LSV
|
|---|
| |