Gene Maqu_0002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMaqu_0002 
Symbol 
ID4654694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinobacter aquaeolei VT8 
KingdomBacteria 
Replicon accessionNC_008740 
Strand
Start bp1990 
End bp3093 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content56% 
IMG OID639809958 
ProductDNA polymerase III, beta subunit 
Protein accessionYP_957297 
Protein GI120552946 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.48538e-06 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTGA CCATCAGCCG TGAATCACTG ATCACCCCGC TGCAAAGCAT CGCGGGCGTT 
GTGGAAAAGA AACAGACCAT GCCGGTGTTG TCCAACGTCC TGCTGGAAGC GGAAGACAAT
ACGCTGACAC TGACCGGTAC CAATATGGAA GTGGAGCTGG TGGCTCGGGT AGCACCAGTC
CATGTGGATC AGCCTGGTCG TATCACGGTT CCGGCGCGGA AGTTGGCGGA TATCTGCCGG
GCCCTGGGGG ATGAGGCGCC TATCGATCTG GCACTGGAAG GCGATCGTCT GCATCTGCGT
TCTGGCAATT CCCACTTCAC CCTGTCGACG CTGCCGGCGG AGCACTTTCC CAATGTCGAA
GATGAGCCGG AAAGCTTCCG CCTGGCATTG CCACAGAAAG AGCTCGGTCG CATGCTGGAT
GCCACTGCGT TCGCCATGGC CCAGCAGGAT GTGCGTTATT ACCTGAACGG GTTGTTGCTG
GAAGTGGATG TGAATCATGC CCGGGTTGTG GCTACCGATG GTCATCGTCT GGCCATGGCC
CAGTTAGATC TGGATACCGG GTGTCCGGAG TTGCGGCAGG TTATTGTGCC TCGTAAAGGT
GTGCTGGAGC TGGCCCGGCT TCTGGATGAT GAAGAATCGC CGGTTACGCT GGTCATCGGT
GACAATCATC TGCGGGCGAC GGTGGGCAGC TATACCTTTA CCTCCAAGTT GATTGAAGGC
AAGTTCCCGG ATTACAACCG GGTGATCCCG CGGGGCGGCG ACAAGACCGT ACTGGCTGAT
CGTTCAACGC TGAAAAGTAC CCTGCAGCGG GCGGGCATTC TGTCTCACGA GAACATCCGT
GGTGTGCGCC TGAACCTTTC TCCCAACCAG TTGCAGGTGT TCGCCAATAA CCCTGACCAA
GAACAGGCCG AAGATGCGTT GCCGGTGGAG TATCAGGGCG AATCACTGCA GATCGGGTTT
AATGTAGGCT ATCTGGTAGA TGTCATGAAT GCACTGGATG ATGACCAGGT GAAGATTACG
TTGTCGAATC CCAACAGCAG TGCGCTGATT GAGGCTCAGA ACGACAACCG TTGCCTGTAT
GTTGTCATGC CGATGCGACT GTAA
 
Protein sequence
MKLTISRESL ITPLQSIAGV VEKKQTMPVL SNVLLEAEDN TLTLTGTNME VELVARVAPV 
HVDQPGRITV PARKLADICR ALGDEAPIDL ALEGDRLHLR SGNSHFTLST LPAEHFPNVE
DEPESFRLAL PQKELGRMLD ATAFAMAQQD VRYYLNGLLL EVDVNHARVV ATDGHRLAMA
QLDLDTGCPE LRQVIVPRKG VLELARLLDD EESPVTLVIG DNHLRATVGS YTFTSKLIEG
KFPDYNRVIP RGGDKTVLAD RSTLKSTLQR AGILSHENIR GVRLNLSPNQ LQVFANNPDQ
EQAEDALPVE YQGESLQIGF NVGYLVDVMN ALDDDQVKIT LSNPNSSALI EAQNDNRCLY
VVMPMRL