| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_3973 |
|---|
| Symbol | |
|---|
| ID | 4653454 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008739 |
|---|
| Strand | - |
|---|
| Start bp | 72288 |
|---|
| End bp | 75002 |
|---|
| Gene Length | 2715 bp |
|---|
| Protein Length | 904 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639809825 |
|---|
| Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
|---|
| Protein accession | YP_957164 |
|---|
| Protein GI | 120537107 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0474] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.704613 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAACA GTGACACGAG CACAAACGCC GGTTGGCACA GTCTCCCAGC CAACCATGTG
CTGGAAGACC TAAAGTGCTC AACCGAAGGT TTGAGTCAAA CCGAAGTCGA TACTCGATTT
GTGAAGTATG GAGCAAACCG GCTGCCGCAG GCACCACGCA GAAACGCCTT TGTGCGTTTT
TTACTCCATT TTCATAACAT TCTCATCTAT GTACTGCTCG GCGCGGCTTT GATAACAGCA
CTTCTGAGCC ATTGGGTCGA TACCGGCGTT ATTCTCGCCG TGGTCGTTGT GAATGCCATC
ATCGGTTTTA TTCAGGAAGG CAAGGCAGAA CAAGCGATGG ATGCTATCCG CCATATGCTC
GCGCCGCAGG CGAACGTGAT CCGTAGTGGC GAACGTGTCA CGATCGATGG CGAACAATTG
GTGCCCGGTG ATATTGTGCT GCTGGAGGCT GGCGATAAAG TGCCGGCTGA CCTTAGACTG
CTTACTGCCC ATGGTTTGTC CGTGCAGGAA GCGGTTTTAA CCGGGGAATC CGTGCCCGTT
GAAAAGCGTA TTCAACCCGT CGCAGACGAT GCCGCGTTGG GGGATCGTGC CTCAATGGCT
TATTCTGGGA CACTCGTATC CAGTGGTCAG GCTAAAGGAG TGGTGGTGGC CACGGGTTCA
GGTACAGAGA TCGGTCGTAT TAGCGGTCTG CTATCGAATG TAGAGACTCT CACTACACCT
CTGGTCGAGC AGATGGCTCT GTTTGCTAAA TGGCTGACCA TCTTTATTCT CATCATCGCC
ACGATGTTAC TGGCGTTTGG GTATTTCGTC GCCCATCACG ATTTCAGCGA AATGTTTATG
GCCGTGGTGG GTTTGTCGGT GGCGGCCATT CCCGAGGGGC TGCCCGCCGT ACTCACGATC
ACCCTGGCGA TTGGGGTGCA GGCAATGGCG CGGCGCAATG CGATCGTACG CCGTTTACCC
GCTATCGAAA CACTCGGATC GGTATCGGTT ATTTGCACGG ACAAAACCGG TACGCTAACG
CGTAACGAGA TGATGGTTGC TTCAGTTCTC TCTAACCGTC ATCTGTTTAA CCTGGAAGGT
ACCGGCTATG AGCCTAAAGG CGCACTCAAG CTCGATGATT CCCATGTGTC TCCTAGCGAA
CATGCTGTCC TTGAAGAACT AGCCCGCGCA GCGACCCTCT GCAACGATGC TGCGCTGCGA
GTGCATGAAG GTGTCTGGGT GGTAGAGGGC GACCCGATGG AAGGTGCGCT GCTGGCATTC
AGCGGTAAGA TGGATGTCAA TGTCCGAGAG GAACAAGCCA GATGGAAACG AACTGATGCA
ATTCCGTTCG ATGCCAAACA CCGTTTTATG GCAACCCTTA ACCATGATCA TGGGCACCAT
GCCTGCATTT TTGTTAAAGG GGCTCCGGAG CAAATCCTGG AAATGTGCAG CAATCAACGG
AGCGTTGACG CCACAACGGA GCATTTGGAC AGTGCTTATT GGCACCAAAA GGCGGAAGCC
ATTGCGGCTT TAGGCCAACG CGTGCTGGCT TTTGCCGTTA GAACAGTACC GCCTGAGCAT
ACGGTGCTGG AACATGAAGA TGTCGGTGGA ACGTTAACGC TGCTTGGTAT GGTGGGCATG
ATAGATCCAC CGCGTGATGA AGCGATTAAA GCCGTTACTG AATGCCACGA GGCCGGTATT
CGTGTGATCA TGATTACCGG AGACCATACC AAAACGGCTG CCGCTATTGG TAAACAGATT
GGCCTGAAAA ACACGGAAAA TGTGTATACA GGAACTGATT TGGATACCCT TGATGATGCT
TCACTGAGTC AGGCTGTGTT GAACTGCGAC GTGTTTGCAC GAACCAGCCC CGAGCATAAA
CTTCGTCTTG TGATGGCACT ACAAAGCCAC GGCAAGACGG TGGCTATGAC GGGGGATGGT
GTGAATGATG CACCCGCCCT AAAGCGGGCG GATGCCGGTA TTGCCATGGG GAAAAAAGGC
AGTGAGGCGG CTAAAGAAGC GTCAGATCTG GTCTTAGCCG ATGATAACTT TGCCTCCATC
GTTGCTGCCG TGCGTGAGGG GCGCACGGTT TACGATAATC TCACCAAAGT GATTTCATTC
ATTCTCCCCG TCAATGGTGG GGAGGCAATC AGTTTGGTGG TGGCGTTACT GATTGGCTTA
ACGCTGCCTA TCGCTCCCAC TCAGATTCTA TGGGTCAATA TGTTAGGGTC TGTTGTATTA
GCGATAACGT TAGCTTTCGA GCCACCTGAA CCGCAGGTGA TGAAACGACC TCCCCGCAAC
CCATCGCAAC CTATCCTATC CTCATTCCTG ATATGGAGAA TTGTGTTTGT CTCTCTTATT
TTTGCGGCGG GGATATTCGG ACAATTCGAA CTGGCACTCC TGATGGGGCG GGACGTTGAA
ATTGCACGCA CGATGGCGGT CAACACGCTG ATCGCAATGG AGGTATTTTA TCTGTTCAGC
ATGCGCTATG GCTACGGCAC GTCGGTAACC TGGCGAGGAG TGGTTGGGAC GAAGCCGGTG
TTGATTTCGT TAGCGTTGAT AACAATAGCG CAATTGCTAT TTATCTATGC CCCCTTCATG
CAGAATATTT TCGATTCGCG GGCTCTGAAA ATTACCGATC TTCTGCTGGT TTTCGCCACC
GGAGTCGCGG TTCTTCTGGT CATTGAAGTT GAGAAGCAAA TGCGATTTGC ACTGAAAAGA
CAACAGGAGG GGTGA
|
|---|
| Protein sequence | MENSDTSTNA GWHSLPANHV LEDLKCSTEG LSQTEVDTRF VKYGANRLPQ APRRNAFVRF
LLHFHNILIY VLLGAALITA LLSHWVDTGV ILAVVVVNAI IGFIQEGKAE QAMDAIRHML
APQANVIRSG ERVTIDGEQL VPGDIVLLEA GDKVPADLRL LTAHGLSVQE AVLTGESVPV
EKRIQPVADD AALGDRASMA YSGTLVSSGQ AKGVVVATGS GTEIGRISGL LSNVETLTTP
LVEQMALFAK WLTIFILIIA TMLLAFGYFV AHHDFSEMFM AVVGLSVAAI PEGLPAVLTI
TLAIGVQAMA RRNAIVRRLP AIETLGSVSV ICTDKTGTLT RNEMMVASVL SNRHLFNLEG
TGYEPKGALK LDDSHVSPSE HAVLEELARA ATLCNDAALR VHEGVWVVEG DPMEGALLAF
SGKMDVNVRE EQARWKRTDA IPFDAKHRFM ATLNHDHGHH ACIFVKGAPE QILEMCSNQR
SVDATTEHLD SAYWHQKAEA IAALGQRVLA FAVRTVPPEH TVLEHEDVGG TLTLLGMVGM
IDPPRDEAIK AVTECHEAGI RVIMITGDHT KTAAAIGKQI GLKNTENVYT GTDLDTLDDA
SLSQAVLNCD VFARTSPEHK LRLVMALQSH GKTVAMTGDG VNDAPALKRA DAGIAMGKKG
SEAAKEASDL VLADDNFASI VAAVREGRTV YDNLTKVISF ILPVNGGEAI SLVVALLIGL
TLPIAPTQIL WVNMLGSVVL AITLAFEPPE PQVMKRPPRN PSQPILSSFL IWRIVFVSLI
FAAGIFGQFE LALLMGRDVE IARTMAVNTL IAMEVFYLFS MRYGYGTSVT WRGVVGTKPV
LISLALITIA QLLFIYAPFM QNIFDSRALK ITDLLLVFAT GVAVLLVIEV EKQMRFALKR
QQEG
|
|---|
| |