Gene Mvan_6048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_6048 
Symbol 
ID4644024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp6458915 
End bp6459646 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content66% 
IMG OID639809513 
ProductABC transporter-related protein 
Protein accessionYP_956807 
Protein GI120406978 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0164038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.602445 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACCG CGGTTTCGTT GACGGCCAAG GACATTCATC TGTCCTTCGG CAAGAGCGCG 
GTGCTGCGGG GAGTGGACCT GGACGTGGCG GCCGGTTCCA GCACCGCGGT GATCGGGCCG
TCCGGATCGG GCAAGTCCAC CCTGCTGCGC ACCCTGAACC GGCTCTACGA GCCGGACCGC
GGCGACATCC TGCTCGACGG GCGTTCGGTG CTGGGTGACA ACCCCGATCA GCTGCGTCAG
CGCATCGGCA TGGTGTTCCA GCACTTTCAG CTCTTCCCCC ATCGCACGGT GCTCGACAAC
GTCACGCTGG CGCCGCGCAA GCTCAAGCGG CTCAGCGGCG ACGAAGCCCG CGAACTCGGG
ATGGCACAGC TGGATCGGGT CGGATTGCGC AACAAGGCCG ATGCCCGCCC GGCGACACTG
TCAGGCGGCC AGCAGCAGCG CGTTGCGATC GCCCGTGCGC TGGCGATGTC ACCCCAGGTG
ATGTTCTTCG ACGAGGCCAC CTCCGCGCTG GATCCCGAAC TGGTCAAAGG GGTGCTGGAG
TTGATCGCCG ATCTCGGCGC CGAGGGGATG ACGATGGTCG TGGTGACCCA CGAGATGGGT
TTCGCGCGGT CGTCGGCCGA CACCGTCGTC TTCATGGATC ACGGTCAGGT GGTCGAAACC
GGACCTCCCG AGCAGCTATT CGAAGCAGCC GAGACGGACC GGTTGCGCCG TTTCCTTTCA
CAGGTGCTCT AG
 
Protein sequence
MTTAVSLTAK DIHLSFGKSA VLRGVDLDVA AGSSTAVIGP SGSGKSTLLR TLNRLYEPDR 
GDILLDGRSV LGDNPDQLRQ RIGMVFQHFQ LFPHRTVLDN VTLAPRKLKR LSGDEARELG
MAQLDRVGLR NKADARPATL SGGQQQRVAI ARALAMSPQV MFFDEATSAL DPELVKGVLE
LIADLGAEGM TMVVVTHEMG FARSSADTVV FMDHGQVVET GPPEQLFEAA ETDRLRRFLS
QVL