Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_6046 |
Symbol | |
ID | 4644022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 6456408 |
End bp | 6457073 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639809511 |
Product | regulatory protein GntR, HTH |
Protein accession | YP_956805 |
Protein GI | 120406976 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.122122 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAAGA AGTATGGGGT CAAGGAGAAA GACCTCGTGG TCTCTCACGT GGTCGAAATG GTGCTGACCG GCAGACTGCG GTCAGGAGAT CGCCTGGACC GCAACGAGAT CGCGCACGAC CTCGGGTTGA GCCGGGTGCC GGTCCAGGAG GCGGTCGTTC AGCTGGAGCA CGACGGCATC GTCTCTACCC GCTATCACCG CGGCGCCTAT GTCGAACGGT TCGACGAGTC AACGGTTCGC GAACACCACG AGCTCTACGG GCTGCTGAGC GGGATCGCGT CCGCGCGGGC CGCCGCCGCG TCGGATCCGG CCGTCGTCGA CACCCTCGAC GGTGAGCTCA CCCAGATGCG CGGTGCGCGC GACTCCCGGC AATTCGACAA CCACGCCGAC CGGTTCCGCA CCACCATCAA CGAGCAGTAC GCCGGCCCGA GACTGCAGGC GGCCGTCAAC TCGTCGCGGA CCTTCATTCC GCGCGCCTTC TGGCAGACCT ACCCGCAGCA TCGCGACCGT CTGCTGCCGT CATACGAGGC AGAACTGGCC GCGGTCCGCG CCGGTGAGCC CGATGCGGCG CGCGCGGCAT GCGCCCAGCG CGCCGAGGTG ATGGCGTCCA TCCTGCTCAC CGAACTGGTC CGGCGCGGCG TGCTGCGCGC CCCGCAATCT CAATAA
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Protein sequence | MPKKYGVKEK DLVVSHVVEM VLTGRLRSGD RLDRNEIAHD LGLSRVPVQE AVVQLEHDGI VSTRYHRGAY VERFDESTVR EHHELYGLLS GIASARAAAA SDPAVVDTLD GELTQMRGAR DSRQFDNHAD RFRTTINEQY AGPRLQAAVN SSRTFIPRAF WQTYPQHRDR LLPSYEAELA AVRAGEPDAA RAACAQRAEV MASILLTELV RRGVLRAPQS Q
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