Gene Mvan_6046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_6046 
Symbol 
ID4644022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp6456408 
End bp6457073 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content68% 
IMG OID639809511 
Productregulatory protein GntR, HTH 
Protein accessionYP_956805 
Protein GI120406976 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.122122 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAGA AGTATGGGGT CAAGGAGAAA GACCTCGTGG TCTCTCACGT GGTCGAAATG 
GTGCTGACCG GCAGACTGCG GTCAGGAGAT CGCCTGGACC GCAACGAGAT CGCGCACGAC
CTCGGGTTGA GCCGGGTGCC GGTCCAGGAG GCGGTCGTTC AGCTGGAGCA CGACGGCATC
GTCTCTACCC GCTATCACCG CGGCGCCTAT GTCGAACGGT TCGACGAGTC AACGGTTCGC
GAACACCACG AGCTCTACGG GCTGCTGAGC GGGATCGCGT CCGCGCGGGC CGCCGCCGCG
TCGGATCCGG CCGTCGTCGA CACCCTCGAC GGTGAGCTCA CCCAGATGCG CGGTGCGCGC
GACTCCCGGC AATTCGACAA CCACGCCGAC CGGTTCCGCA CCACCATCAA CGAGCAGTAC
GCCGGCCCGA GACTGCAGGC GGCCGTCAAC TCGTCGCGGA CCTTCATTCC GCGCGCCTTC
TGGCAGACCT ACCCGCAGCA TCGCGACCGT CTGCTGCCGT CATACGAGGC AGAACTGGCC
GCGGTCCGCG CCGGTGAGCC CGATGCGGCG CGCGCGGCAT GCGCCCAGCG CGCCGAGGTG
ATGGCGTCCA TCCTGCTCAC CGAACTGGTC CGGCGCGGCG TGCTGCGCGC CCCGCAATCT
CAATAA
 
Protein sequence
MPKKYGVKEK DLVVSHVVEM VLTGRLRSGD RLDRNEIAHD LGLSRVPVQE AVVQLEHDGI 
VSTRYHRGAY VERFDESTVR EHHELYGLLS GIASARAAAA SDPAVVDTLD GELTQMRGAR
DSRQFDNHAD RFRTTINEQY AGPRLQAAVN SSRTFIPRAF WQTYPQHRDR LLPSYEAELA
AVRAGEPDAA RAACAQRAEV MASILLTELV RRGVLRAPQS Q