Gene Mvan_5887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5887 
Symbol 
ID4648145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp6272187 
End bp6273479 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content71% 
IMG OID639809364 
Producthypothetical protein 
Protein accessionYP_956658 
Protein GI120406829 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.67395 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGAGAC GCAACCGCGA ACGACGGGCG GCCAAGAAGA AGCAACGGCG GCGGCCGGCG 
GCCGAACGTG AGCACAGCCG CTCCGATACA GGGCCGAGTC GGGCGCAGAT CCTTGAAGGC
CTCGTCATCG CGTTGAGCAC GGCTGCCGAC CTCCCCGGTC CGGGTCGTGC GGCTGAGCTC
TTGGAGCAGT ACCGAGGCTA CGAGCGTGAA CTCGATATCG CTGCCGACCT CGTCGTGCAC
GAGGCCATCC GGGCGGCGTG GGAGCGCGGA TGGTCGCCGA CGGATCTGCA CGAGATCGCG
CGCCGCAGGG TGGACGCGCC CGTCGTGCGG TACCTCGATG CGGCGATCGT GCTCGAGTCC
CAGCGATACT CGGCGCCGAC GCTGCACCCG CGGTGGAGTG CCGAACTCGC CGAGATCTCG
GCGGCCGCCG GATCATCGGC GACCGCGCCC CAGATGTGGA ATTGGGCCGC TTCACATTCC
ACCGGCGAAC ATGCGGTGAT AACCATCGTG CTGCAGCTGC TGCACCTGCT GGGAAGGATC
CCGAAGATCC AGCCGGTGCT CCCCCTTCCC GGGGAGCACC GCCAGGCACC CGGCGGGGCC
GAGGGGGTGG ACGAGAAGAT GCTGGCCCGG GTGCGCGCAC TGCTGGCCAA GGCCGAGGCC
ACCGAGTACC CCGATGAGGC CGAGGCGCTC TCGGCGAAGG CGCAGGCGCT CATGGTGCGG
CACTCGTGGC GGGAGGCGGT AGCCGATCAC GACCGTGGCC GGGCGGCTGT CGCCGCGGCA
CGCAGGATCT GGATCGGCAA TCCGTACGTC GCGGCGAAGG TCGCGCTGGT GCAGGCCGTC
GCCCAGGCCA ACCGGTGCCG CACCGTGTGG ATCAAAGACC TGGGTTGTGT CGTCACGGTC
GGATCGGAGA CCGACCTGGA CCTGGTCGAG CTGCTCGCCA CCTCACTGCT CGTGCAGGCC
AGCCGGGCGA TGCTGGTCGC CGGGCGGCAC CACGGTGTCC GGGGGCAGAC GCGGACCAAG
TCATTCCGGC TCTCCTTCCT GGTCGCCTAC GCCGCCCGCA TCGGTGAGCG GCTCAGCGCC
GCCAGTTCGT CGGCCACGGC CGAACTGCAG CGCGACGACC GGCTGCTGCC GGTGCTCGCA
GCCCGCAACC GCGCGGCCGA CGAGACGTTC ACCCGGCTGT TTCCCGCGAC CGTCGCCAGC
CCGCTGGTGG CCTACGACCC CGCCGGCACG GGCGCCGGTC GCGCGGCGGC GGACACGGCG
ATGCTCGATG TCCGCGACTC GATCGCCGGC TAG
 
Protein sequence
MGRRNRERRA AKKKQRRRPA AEREHSRSDT GPSRAQILEG LVIALSTAAD LPGPGRAAEL 
LEQYRGYERE LDIAADLVVH EAIRAAWERG WSPTDLHEIA RRRVDAPVVR YLDAAIVLES
QRYSAPTLHP RWSAELAEIS AAAGSSATAP QMWNWAASHS TGEHAVITIV LQLLHLLGRI
PKIQPVLPLP GEHRQAPGGA EGVDEKMLAR VRALLAKAEA TEYPDEAEAL SAKAQALMVR
HSWREAVADH DRGRAAVAAA RRIWIGNPYV AAKVALVQAV AQANRCRTVW IKDLGCVVTV
GSETDLDLVE LLATSLLVQA SRAMLVAGRH HGVRGQTRTK SFRLSFLVAY AARIGERLSA
ASSSATAELQ RDDRLLPVLA ARNRAADETF TRLFPATVAS PLVAYDPAGT GAGRAAADTA
MLDVRDSIAG