| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_5729 |
|---|
| Symbol | |
|---|
| ID | 4644184 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 6118094 |
|---|
| End bp | 6120265 |
|---|
| Gene Length | 2172 bp |
|---|
| Protein Length | 723 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639809205 |
|---|
| Product | glycogen debranching enzyme GlgX |
|---|
| Protein accession | YP_956500 |
|---|
| Protein GI | 120406671 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
|---|
| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACCCAGA TCGCCGGCTC GTCGCGCACC GCCCTCGCGC TGGAACTCTG GCCGGGCAAG
GCCTACCCTC TCGGCGCCAC CTATGACGGC TCCGGAACCA ACTTCGCGCT GTTCAGCGAG
GTAGCCGAGA AGGTCGAGCT GTGCCTGTTC AGTGACGACG CAGCCGGAGG GACCGTCGAG
ACCCGGGTGA CCCTGCCCGA GGTGGACGGC TTCGTGTGGC ACGGGTTCAT CCCGAACATC
GAGCCGGGAC AGCGCTACGG CTACCGGGTG TACGGACCCT ACGACCCCGC CGCCGGGATG
CGCTGCAACC CGAACAAACT GCTGCTCGAC CCGTACTCCA AGGCCATCGA CGGCAACTTC
GACTGGAACC AGTCGCTGTT CGGCTACAAC TTCGGCGATC CCGACAGCCG CAACGACGAC
GACTCGGCCG ACAGCATGCC CAAGTCGGTG GTCATCAACC CGTTCTTCGA CTGGGGCGTC
GACCGGCCGC CCAACCACGA GTACGCCGAC ACGGTGATCT ACGAGGCGCA CGTCAAGGGC
CTGACCCAGA CGCACCCCGA CATCCCCGAG CAGATCCGCG GCACGTACGC CGCGGTCGCG
CATCCGGCGA TCATCGAGCA CCTCACGTCG CTGGGGGTCA ACGCCATCGA GCTGATGCCG
GTGCACCACT TCGCGAACGA CTCGACGCTG ATCGACAAGG GCCTGTCCAA CTACTGGGGC
TACAACACGA TCGGCTTCCT GGCACCCGAC GCCAAGTACA GCTCCAACCC CAATCCCGGC
GGTCAGGTGC AGGAGTTCAA GGCGATGGTG CGCGCGCTGC ACGAGGCGAA CATCGAGGTC
ATCCTCGACG TCGTCTACAA CCACACCGCC GAGGGCAACC ACCTCGGCCC GACCTTGTCG
ATGCGCGGCA TCGACAACGC CGCGTACTAC CGCCTCGTCG ACGACGACAA GCGCTACTAC
ATGGACTACA CGGGCACCGG CAACAGCCTC AACGCCGGAC ATCCACACTC ACTGCAGCTC
ATCATGGATT CACTGCGGTA CTGGGTGACC GAGATGCACG TGGACGGATT CCGGTTCGAC
CTGGCCTCCA CGCTGGCGCG CGAGTTCTAC GACGTCGACC GGCTGTCCAC CTTCTTCGAA
CTCGTCCAGC AGGATCCCAC CGTCAGCCAG GTGAAGCTCA TCGCCGAACC CTGGGACGTC
GGGCCCGGCG GCTACCAGGT CGGTAACTTC CCGCCGCAGT GGACGGAATG GAACGGCAAG
TACCGCGACA CGGTGCGCGA TTTCTGGCGT GGTGAACCGG CCACGCTCGA CGAATTCGCC
TACCGGCTCA CCGGATCGGC CGACCTCTAC GAACACACGG CGCGGCGGCC GGTGGCGTCC
ATCAACTTCG TCGTCGCCCA CGATGGATTC ACGCTGCGCG ACCTGGTCTC CTACAACGAG
AAGCACAACG AGGCCAACGG TGAGGACAAC AACGACGGGG AAAGTCACAA CCGGTCGTGG
AACTGCGGTG TCGAGGGTCC CTCCGACGAC CCGGAGGTCC TCGCGCTGCG GTCCAAGCAG
GAGCGCAACT TCCTGACCAC GCTGCTGTTG TCGCAGGGCG TGCCGATGAT CTGCCACGGC
GACGAGTTGG GCCGCACCCA GGGTGGCAAC AACAACGGTT ACTGCCAGGA CAACGAGATC
ACCTGGATCG ACTGGGCCAG TGCCGACACC GAACTGCTGG ACTTCACCCG GATGGTGTCA
CGGCTGCGCG CCGAGCACCC GGTGTTCCGC AGGCGGCGCT TCTTCAGCGG CAAGCCCGTC
GGCCGCCGCG GCCAGGCCGG CCTGCCGGAC ATCGCCTGGT TCACCCCCGA GGGGGCGGAG
ATGACAGGCG AGGACTGGGG TTCGGGTTTC GCGAAGTCCG TCGGTGTCTA CCTGAACGGC
CACGGCATCC CCGACATGGA CGCGCGCGGT CAACGCGTCA TCGACGATTC GTTTCTGCTG
TTCTTCAACG CCCACCACGA ACCGATCGAG TTCACGTTGC CGCCCAAGAA GTTTGCGACG
GCATGGCAGC CCGTGGTGTC CTCCGCGGCG CCGGTGGCGC CGGAACCCGG CGAGCCTCAC
CAGGCCGGCG CCACGGTGTC CGTCGAGGCG AGGACCGTCC TGGTGCTGCG GGCCGAGTCG
AACCCCGGCT GA
|
|---|
| Protein sequence | MTQIAGSSRT ALALELWPGK AYPLGATYDG SGTNFALFSE VAEKVELCLF SDDAAGGTVE
TRVTLPEVDG FVWHGFIPNI EPGQRYGYRV YGPYDPAAGM RCNPNKLLLD PYSKAIDGNF
DWNQSLFGYN FGDPDSRNDD DSADSMPKSV VINPFFDWGV DRPPNHEYAD TVIYEAHVKG
LTQTHPDIPE QIRGTYAAVA HPAIIEHLTS LGVNAIELMP VHHFANDSTL IDKGLSNYWG
YNTIGFLAPD AKYSSNPNPG GQVQEFKAMV RALHEANIEV ILDVVYNHTA EGNHLGPTLS
MRGIDNAAYY RLVDDDKRYY MDYTGTGNSL NAGHPHSLQL IMDSLRYWVT EMHVDGFRFD
LASTLAREFY DVDRLSTFFE LVQQDPTVSQ VKLIAEPWDV GPGGYQVGNF PPQWTEWNGK
YRDTVRDFWR GEPATLDEFA YRLTGSADLY EHTARRPVAS INFVVAHDGF TLRDLVSYNE
KHNEANGEDN NDGESHNRSW NCGVEGPSDD PEVLALRSKQ ERNFLTTLLL SQGVPMICHG
DELGRTQGGN NNGYCQDNEI TWIDWASADT ELLDFTRMVS RLRAEHPVFR RRRFFSGKPV
GRRGQAGLPD IAWFTPEGAE MTGEDWGSGF AKSVGVYLNG HGIPDMDARG QRVIDDSFLL
FFNAHHEPIE FTLPPKKFAT AWQPVVSSAA PVAPEPGEPH QAGATVSVEA RTVLVLRAES
NPG
|
|---|
| |