Gene Mvan_5659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5659 
Symbol 
ID4643344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp6050885 
End bp6052144 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content69% 
IMG OID639809135 
Productseryl-tRNA synthetase 
Protein accessionYP_956430 
Protein GI120406601 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0172] Seryl-tRNA synthetase 
TIGRFAM ID[TIGR00414] seryl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.466733 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.143562 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTGACC TCAAGGTGCT GCGAGAGAAT CCGGACGCCG TGCGTGCATC ACAGCTGGCG 
CGGGGCGAGG ATCCCGGCCT TGTCGATGCG CTCGCCGACG CCGACACCGC CAGGCGCGCC
GCCATCTCGG CCGCCGACAA CCTGCGCGCC GAGCAGAAGT CGGCCAGCCG GCTGGTCGGG
AAGGCCTCAC CCGAGGAGCG GCCCGCCCTG CTGGCCGCCG CCAAGGAGCT GGCCGACAAG
GTCAGGGCCG CGGAGTCCGC CCAGGCCGAG GCCGAGAAGG CCTACAGCGC CGCCCACATG
GCGATCTCGA ACGTCATCAT CGACGGTGTC CCGGCCGGGG GCGAGGACGA CTTCGTGGTG
CTCGACACCG TCGGTGAACC GACCGCCCTC ACCGATCCGA AGGACCACCT CGAGCTCGGG
GAGTCGCTCG GACTGATCGA CATGGAGCGC GGCGCGAAGG TCTCGGGGTC ACGTTTCTAC
TTCCTCACCG GATTCGGGGC GCTGCTGCAG CTGGGCCTGT TCCAGCTCGC GGTGCGGACC
GCCACCGAGA ACGGATTCAC GCTCGTCATC CCGCCGGTGT TGGTGCGGCC CGAGATCATG
TCGGGCACCG GCTTCCTCGG CGCCCACGCC GACGAGGTGT ACCGGGTGGA GGCCGACGAC
CTCTACCTGG TCGGAACCTC CGAGGTGCCG CTGGCGGGTT ACCACTCCGG CGAGATCCTC
GACCTGTCGG AGGGCCCGAA GCGGTACGCC GGCTGGTCGT CGTGTTTCCG CCGGGAAGCA
GGCAGCTACG GCAAGGACAC CCGGGGCATC ATCCGGGTGC ACCAGTTCGA CAAGGTCGAA
GGGTTCGTCT ACTGCCGGCC GGAGGAGGCG GAGGCCGAGC ACGACCGTCT TCTCGGCTGG
CAGCGACAGA TGCTCGGCCT CATCGAGGTG CCATACCGGG TGATAGACAT CGCCGCAGGC
GATCTGGGCT CTTCGGCGGC GCGCAAGTTC GACTGCGAGG CGTGGGTGCC GACCCAGCAG
ACCTACCGCG AGCTGACCTC GACGTCGAAC TGCACGACGT TCCAGGCCCG CCGGTTGGGG
GTGCGCTACC GCGACGAGAA CGGCAAACCG CAGACGGCGG CCACGCTCAA CGGCACGCTG
GCCACTACCC GCTGGCTGGT GGCCATCCTG GAGAACCATC AGCAGCCCGA TGGCAGCGTA
CGGATCCCCG AGGCGCTGGT GCCGTACGTC GGCACCGAGG TGCTCACCCC CAAAAACTAG
 
Protein sequence
MIDLKVLREN PDAVRASQLA RGEDPGLVDA LADADTARRA AISAADNLRA EQKSASRLVG 
KASPEERPAL LAAAKELADK VRAAESAQAE AEKAYSAAHM AISNVIIDGV PAGGEDDFVV
LDTVGEPTAL TDPKDHLELG ESLGLIDMER GAKVSGSRFY FLTGFGALLQ LGLFQLAVRT
ATENGFTLVI PPVLVRPEIM SGTGFLGAHA DEVYRVEADD LYLVGTSEVP LAGYHSGEIL
DLSEGPKRYA GWSSCFRREA GSYGKDTRGI IRVHQFDKVE GFVYCRPEEA EAEHDRLLGW
QRQMLGLIEV PYRVIDIAAG DLGSSAARKF DCEAWVPTQQ TYRELTSTSN CTTFQARRLG
VRYRDENGKP QTAATLNGTL ATTRWLVAIL ENHQQPDGSV RIPEALVPYV GTEVLTPKN