| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_5624 |
|---|
| Symbol | |
|---|
| ID | 4645019 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 5999321 |
|---|
| End bp | 5999824 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639809100 |
|---|
| Product | alkylhydroperoxidase |
|---|
| Protein accession | YP_956395 |
|---|
| Protein GI | 120406566 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2128] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.522568 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAACCATC TTCGCGGTCC AGTCGGCGCT AGCGTCGAAG ACATGACACA GACTCTGACC
ACCCAGGACC GCCTCAAGAT CTACAAGGCA TCGCCCGAGC TCTACGACGC GATGATGACG
CTCTCCACGG CCGCGGCCAA GGACGTCGAC CCCGAGCTGG CGGAGCTCAT CAAGATCCGT
GCCTCGCAGC TCAACCACTG CGCGTTCTGC CTCGACATGC ACACCCGCGA CGCCCGCAAA
GCCGGCGTCG GCGAACAGAA GCTCGACGTC CTGGCCGCGT GGACCGAGGC GGGGGAGCTG
TTCGGCGAGC GGGAACGGGC CGCGCTGGCA CTGACCGAGG CCGTCACCGA GCTCGGTCGC
GACGGCGTCC CCGACGACGT GTACGCCCGG GCCGCAGCGG TGTTCTCCGA CCGGGAACTC
GGACAGGTCA TCGCGATGGT GGTGACGATC AACGCCTGGA ACCGCATCAA CGTCGCGGTG
CGGATGCCCA TACCCCGCCG CTGA
|
|---|
| Protein sequence | MNHLRGPVGA SVEDMTQTLT TQDRLKIYKA SPELYDAMMT LSTAAAKDVD PELAELIKIR
ASQLNHCAFC LDMHTRDARK AGVGEQKLDV LAAWTEAGEL FGERERAALA LTEAVTELGR
DGVPDDVYAR AAAVFSDREL GQVIAMVVTI NAWNRINVAV RMPIPRR
|
|---|
| |