Gene Mvan_5586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5586 
Symbol 
ID4646129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5965062 
End bp5965979 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content72% 
IMG OID639809058 
Product2-nitropropane dioxygenase, NPD 
Protein accessionYP_956357 
Protein GI120406528 
COG category[R] General function prediction only 
COG ID[COG2070] Dioxygenases related to 2-nitropropane dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.658342 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCAATC GTGTTCAGGA GCTGCTCGGC GTCGAGTTCC CCGTCGTGCA GGCGCCCATG 
ACCTACATCG CGCGCGCCGA ACTGGCGGCC GCGGTGTCCG AGGGCGGTGG CCTCGGCATG
GTCGAGACGC TGACCCCCGA GGGACGCGAA GACCTGCTGC GGGTCCGCGA CCTCACCGAC
CGGCCGGTGG CGGCGAACCT GATGATCCAG GGCTGGAAGC GTGACCCGTC GATCGTCGAC
ACCCTGGCGG CCGCCGGGGT GCGGCACGTG TTCACCTCCG CCGGCGACCC TGCCCTGTTC
ACCGCGCGGC TGCACGACGC CGGGATGACG GTCGTGCACG TCGTCGGATC GCTCAAGGGC
GCGCTGAAGG CCGCCGACGC CGGGGTCGAC GCACTGGTGG TGGAAGGGGT CGAGGGCGGC
GGGTTCAAGT CCGCGCTGGG TGCGTCGACG ATGGTGCTGC TTCCGCTGAT CGCCGACCGG
GTGGACCTGC CGATCATCTG CGCGGGCGGC GTGTGCGACG CCCGCTCGGG GGCGGCGGCG
GTGGTGCTGG GCGCGGAGGG CGTGCAGATG GGCACCCGCA TGCTGGCCAG CGTCGAGGCC
GCGGTGCACA CCAATTTCAA GGATGCGATC GTCGCGGCCG ACGACTCCGG GACGGTGCTG
CTGGACGTCC CGGGCAACCC GACGATGCGG GTGCTGCGTA CCGGGTTGGC GGCGCGGATC
GACGAGCACC CCGCCGACGC GCAGCTGCTC GGGCGGATCA CCGACCTGTA CTTCGGGGGC
GACATGGAGG CCAGCGTCGC CAACACCGGT CAGGTGTCGT CGCGGATCAC CGAGCTGCGG
CCGGTCGCCG AAATAGTGCG GCAGACGTGG CGCGGCATCG AATCGGTGCT CGACAGCGCG
CGCACGCGGC TCGATTGA
 
Protein sequence
MTNRVQELLG VEFPVVQAPM TYIARAELAA AVSEGGGLGM VETLTPEGRE DLLRVRDLTD 
RPVAANLMIQ GWKRDPSIVD TLAAAGVRHV FTSAGDPALF TARLHDAGMT VVHVVGSLKG
ALKAADAGVD ALVVEGVEGG GFKSALGAST MVLLPLIADR VDLPIICAGG VCDARSGAAA
VVLGAEGVQM GTRMLASVEA AVHTNFKDAI VAADDSGTVL LDVPGNPTMR VLRTGLAARI
DEHPADAQLL GRITDLYFGG DMEASVANTG QVSSRITELR PVAEIVRQTW RGIESVLDSA
RTRLD