Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_5549 |
Symbol | ligC |
ID | 4645988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 5929804 |
End bp | 5930886 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639809022 |
Product | ATP-dependent DNA ligase |
Protein accession | YP_956321 |
Protein GI | 120406492 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1793] ATP-dependent DNA ligase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.480302 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACTTC CCGTGATGCC CCCGGTCTCG CCGATGCTGT CGAAGTCGGT CGACACCATC CCCGACGGCG CCTCCTACGA GCCCAAGTGG GACGGATTCC GGTCGATTCT GTTCCGGGAC GGCAACGAGG TGGAGCTCGG CAGCCGCAAT GAGCGGCCGA TGACGCGGTA TTTTCCCGAG CTCGTCGAGG CGGCCCGCGC CGAGTTGCCG CCCCGCTGCG TCGTCGACGG AGAGATCGTC GTCGCCACCG GCGGCGGCCT CGACTTCGAG GCGCTGCAAC TGCGGCTGCA CCCGGCCGCA TCGCGGGTGC GGATGCTGGC CGAGAAGACG CCGGCGTCGT TCATCGCATT CGACCTGCTC GCGCTCGACG ACACCGACTA CACCGCGCGG CCGTTCGCCG AGCGGCGGGC GGCGCTGGTC GGGGCGCTCG CCGGGTGCGG CCCCACGTTC CACGTCACAC CGGCCACCCT GGACGTCGCG ACGGCGCGAC GGTGGTTCGA CGAGTTCGAA GGCGCCGGGC TCGACGGAGT GATCGCCAAG CCGCTCGACG GGCACTACCT GCCGGACAAG CGGGTGATGT TCAAGATCAA GCACCAGCGC ACCGCGGACT GTGTGGTGGC CGGCTACCGC CTGCACAAGT CGGGCCCCGA TGCGGTGGGT TCACTGCTGC TGGGGCTCTA CGACGACGAC GGTTCGCTGG CGTCGGTGGG CGTCGTCGGC GCGTTCCCGA TGGCGCGGCG TCGTGAGCTC GTCACCGAAT TGCAGCCGCT GGTGACCACG TTCGACGGGC ACCCGTGGAA CTGGGCCGCG CAGGTCGACC CGGACACGGT GCGCCGCTAC GGGGGCGGCT CGCGGTGGAA CGCCGGCAAG GACCTTTCGT TCGTCCCACT GCGTCCCGAA CGCGTCGTCG AGGTGCGCTA TGACCACATG GAGGGGCAAA GGTTCCGGCA CACAGCGCAA TTCAACCGCT GGCGACCCGA CCGCGACCCG CTTTCCTGCA CGTTCGACCA ACTCGACCGC CCACTGACGT TCAGCCTCGA CGACATCGTG CCGGGCCTTG GCGGTACCCG GCCCCGGGGC TAA
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Protein sequence | MQLPVMPPVS PMLSKSVDTI PDGASYEPKW DGFRSILFRD GNEVELGSRN ERPMTRYFPE LVEAARAELP PRCVVDGEIV VATGGGLDFE ALQLRLHPAA SRVRMLAEKT PASFIAFDLL ALDDTDYTAR PFAERRAALV GALAGCGPTF HVTPATLDVA TARRWFDEFE GAGLDGVIAK PLDGHYLPDK RVMFKIKHQR TADCVVAGYR LHKSGPDAVG SLLLGLYDDD GSLASVGVVG AFPMARRREL VTELQPLVTT FDGHPWNWAA QVDPDTVRRY GGGSRWNAGK DLSFVPLRPE RVVEVRYDHM EGQRFRHTAQ FNRWRPDRDP LSCTFDQLDR PLTFSLDDIV PGLGGTRPRG
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