Gene Mvan_5546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5546 
Symbol 
ID4645985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5926620 
End bp5928335 
Gene Length1716 bp 
Protein Length571 aa 
Translation table11 
GC content68% 
IMG OID639809019 
Producthypothetical protein 
Protein accessionYP_956318 
Protein GI120406489 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.419973 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGGTT CGGTGTTCGC GGGTTTGGAG GAGTCCGCGT TGATCGCTGT GATCGAGCAG 
TGTGCGCGTG AGGAGGCCCA GGCGGGAGCG CATAAGTCGG CCGCGATCGC GCAGTTGGTG
AGCTCCACGG TGAGCTGGGA TGACGAGCAT GACGACTGGG TGTATGACTG CTGGGCGCAG
ACCGCCTCTG AGCTGGGTGC GGTGCTCAGC CTGGGACAGA GGCGGGCCTC GGGGCAGATG
CGGATCGCGA TCGCGTTGCG CGACCGGTTG CCTCGGCTTG CCGAGCGGTA TCTGCAGGGC
CGGGTCAGTG CACAGGTGGT GTCGAAGATC TGTTGGCGCA CCCGTCTGGT CGTCGATTCG
CAGGTGTGGG CGCTGCTCGA CGGGGAGTTG GCAACCCAAG CGCAGCGGTG GGGGTCGTTG
TCGGAAGAAG CGCTAGTACG TGCCATTGAT GCGCTGATCG AGCGCTATGA CTCCGATGCG
GTGATCCGGG CCCGTGAACA CGTCAGCGGC CTGGACTTTA GGGTCGGGGC CAGCGACGAC
CCCGACGCAC TGGTGATGGT GTGGGGCAAA ATCCTGGGCT GCGATGCGGC GGTGCTGGCG
GCCCGCATCG CCGAACTGCT CAAAGGGCTC TGCGACAACG ACCCCCGCAG CGTCTGTGTG
CGGCGCTCGC ATGCGGTCGG GGCCATTGTC CGCGGCCAGG ACCATCTGCG GTGCCGCTGC
GGCTCCCCGG ACTGTACCGC CTCCGCCGCA CCAGCGCCGG GGTCGTCGAA CGTGGTGATC
TCGGTGCTCG CCGACCCCGC CGCCCTCGAC GCCGTCCGCC AACTCATCGC CGCCGAAGAC
CGTGAACAAC AAGACAAACT CGCCGATAAA CAAGCGAAAG CGAAGGAGCA GGGGAAAGCA
GAATCGCAGC CGCAGACAGA ACCGATCCCG CAGGCCGAGG CCGAGGTCGA GGTCGAGGTC
GAGGTCGAGC CCGAGCCCGA GCCCGAGCCG GCGATCGAAT CTGAGCCCGC CCCCGTCAAG
CCTGTTGCGC CGTCGAATCC TGCTGCGTGT GTGCGGGATT CAGGAGTGGC GTTGCTGCCC
GGGGTGAAGG TCCTGCCGAT CGTGGCACTG GCCGAGGCGA TCCGGGCCGG CGCGGCGATC
AAAACCCTGT GGCTGCCCGG CCCCGACCCG GAACCGCACT ACCGCCCCTC GACCAAGCTG
GCGGCGTTCG TGCGTGCCCG GGACCTGTTC TGCCGCTACC CCGGCTGTGA CGTCCCCGCC
GAACACTGCG ACCTCGACCA TGTCGTGCCC TATCCGTACG GGCCCACCCA TCCGTCGAAC
CTGAACTGCA AATGCCGCAC CCACCACCTC GGCAAGACCT TCGCCGAGGG CTGGCAGGAA
CAGCAACTCC CGGACGGGAC GGTGCTGTGG ACGACCCCGG CCGGGCAGCG CTGCACCACG
GTGCCCGGTA GTTGGTTGTT CTTCCCCGGT TGGGACACCA CCACCGCCGA ACTCCCGCCG
ATGGCCCAGC CGCCACCGGA TCCCGACCGG CTGGCCAAGA TGCCGAAACG ACGACGTACC
CGCGCCGCCG AGGAGGCCGC CCGCATCAAA GCCGAACGCG AACACAACGC GCTCCAACGC
GCCCTCGAAC GAAAACAGGC CCTCGGCCAA CAACCGAGAA GCGTAGCCGC GCAACGGATC
CGACAAGATT ACGGCGCCGA ACCGCCACCC TTCTGA
 
Protein sequence
MFGSVFAGLE ESALIAVIEQ CAREEAQAGA HKSAAIAQLV SSTVSWDDEH DDWVYDCWAQ 
TASELGAVLS LGQRRASGQM RIAIALRDRL PRLAERYLQG RVSAQVVSKI CWRTRLVVDS
QVWALLDGEL ATQAQRWGSL SEEALVRAID ALIERYDSDA VIRAREHVSG LDFRVGASDD
PDALVMVWGK ILGCDAAVLA ARIAELLKGL CDNDPRSVCV RRSHAVGAIV RGQDHLRCRC
GSPDCTASAA PAPGSSNVVI SVLADPAALD AVRQLIAAED REQQDKLADK QAKAKEQGKA
ESQPQTEPIP QAEAEVEVEV EVEPEPEPEP AIESEPAPVK PVAPSNPAAC VRDSGVALLP
GVKVLPIVAL AEAIRAGAAI KTLWLPGPDP EPHYRPSTKL AAFVRARDLF CRYPGCDVPA
EHCDLDHVVP YPYGPTHPSN LNCKCRTHHL GKTFAEGWQE QQLPDGTVLW TTPAGQRCTT
VPGSWLFFPG WDTTTAELPP MAQPPPDPDR LAKMPKRRRT RAAEEAARIK AEREHNALQR
ALERKQALGQ QPRSVAAQRI RQDYGAEPPP F