Gene Mvan_5461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5461 
Symbol 
ID4645200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5843236 
End bp5843763 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content70% 
IMG OID639808937 
ProductPadR-like family transcriptional regulator 
Protein accessionYP_956237 
Protein GI120406408 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.399504 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTTC GGATAGCGGC ACTCGGCCTG CTGGCCGAGG GCTCCGCGAG CGGATACGAC 
CTGCTCAAGC AGTTCGAGAA GTCCATGGCC AACGTGTGGC CAGCCACGCA GAGCCAGCTG
TACTCCGAGC TCAACAAGCT CGCCGCCGGC GGGCTGATCG AGGTCTGCGC GGTCGGCCCG
CGCGGACGCA AGGAGTACCG GATCACCGAC GCCGGACGCG CCGAGCTGCA GCGCTGGGTG
GCCGAGCGGC AGGACGACCC GCCGGTCCGC AGCGCAGGCC TGCTACGGGT CTTCCTGCTC
GGCCTGGTTC CGCCCGAGCA GGCACGGGCC CATCTGCATG CCATGGCCGA GGAGGCGGAC
GGCGAGGTCC GGCGGCTGAC CGAGCTGCGG GAATCGCTGA CCGGCGGGCG TGCCGCCGAC
CCCACCGACG AGAGCTTCTT CGGGTTCGCC GCGCTCGACT ACGGGCTGCG GCTGAATGCG
ATGCAGGCCG AGTGGGCCCG TTCGGTGATC GACCGATTGG ACACCTGA
 
Protein sequence
MSLRIAALGL LAEGSASGYD LLKQFEKSMA NVWPATQSQL YSELNKLAAG GLIEVCAVGP 
RGRKEYRITD AGRAELQRWV AERQDDPPVR SAGLLRVFLL GLVPPEQARA HLHAMAEEAD
GEVRRLTELR ESLTGGRAAD PTDESFFGFA ALDYGLRLNA MQAEWARSVI DRLDT