| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_5418 |
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| Symbol | |
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| ID | 4646611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | + |
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| Start bp | 5796746 |
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| End bp | 5797945 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639808893 |
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| Product | phage integrase family protein |
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| Protein accession | YP_956194 |
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| Protein GI | 120406365 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.135045 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGCA CGCAACGCAT CGCCCTGGCC GAGGACACCG ATACGTTCAC CGTGGTGGGT
CCGGATTTTC TGCCGATCGA CCCGGCCGAG GAGTTCCTGC AGTTTCTGCG CGACGACGAG
GCCTCCCCTA ACACGGTGAA GGCCTACGCC GCGGGGCTGG CGGCCTGGTG GACGGTGCTG
GAGCACACCG GTACCGACTG GCGTGAGATC AGCACCAGCC TGTTCGGGCA GTTTCTGGCC
TATCTGCGCA CCGGGGACCT GCCGGGCACC GCCCGCATCG GCGCCCCCGA GGGCTGGCTC
GGCGCGGCCA GCACCGCGTT GCGGGCCGCG GCGGTGCTGG CCTGCTACCG CTACCACGCC
GACGCCCACG GGCTCGTCGG CCCGTATCAG CGGCTGCACA CCAGCCGCGG CAAACGTGGC
CGGTCACGTT ACATCCCGAT GCTGGCCGGG GTCGGTGCGG CGCGGCCGGC CAAGGACCGC
CCCATTTACA CGGTGCGCCG CGGCAATCGC GCCGCCACCC CGGTGCTGCT GCCCGCCCAG
GTCGGGCTCA TTCTCGATGG CTGCGCCACC CAAACCGGCC ATGAGTGGTC CGGGCCGGCA
TCGGGGCTGC GCGACCGTTT GTTGTTCGCG GTGCTGGCCG AAACGGGGAT GCGGTTGGGG
GAGGCATTAT CGTTGCGGCA CCACGATTTC CACATCGGCG CTGGCGGCAC CCCGTGGATC
GATATCGCCG CGCGCCAAGA CCACCCCCGC GGAGCGCGCG GCAAGACGCT CTCCCCGCGG
CGGGTCTATA TCGGTGACGA CCTGGAGGCG CTGTATTCCT CCTACGTGTG GCATCTGATC
GATCACGGCG CGGATCTGGC AGTGCCGGAC CTGACCACTC ATTTCGTGTT CGTCAACCTG
ACCGCGGGGA CACCGTTCGC GCCGACGCGT CCTGAAACCG TCTACGCCAA AGTCGATTCG
GTCACCAGCC GCGCCGCCGG GGCGCTGCCA CAGGGGTGGT CTCCGCACTG GCTGCGCCAC
ACCCACGCCA CCGCGCTGCT GCTCTCCGGC GCGGCCCCAC ACGTGGTGAT GCGCCGCCTG
GGCCACGCCG ACATCCAAAC CACCCTCTCC ACCTACGGGT GGGTCACCGA GGACGCCGAG
ATGCGCACCC TGGCCCAATG GCGCAACTAC GTGGCCGGCT GGAAAGGACT CACACCGTGA
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| Protein sequence | MARTQRIALA EDTDTFTVVG PDFLPIDPAE EFLQFLRDDE ASPNTVKAYA AGLAAWWTVL
EHTGTDWREI STSLFGQFLA YLRTGDLPGT ARIGAPEGWL GAASTALRAA AVLACYRYHA
DAHGLVGPYQ RLHTSRGKRG RSRYIPMLAG VGAARPAKDR PIYTVRRGNR AATPVLLPAQ
VGLILDGCAT QTGHEWSGPA SGLRDRLLFA VLAETGMRLG EALSLRHHDF HIGAGGTPWI
DIAARQDHPR GARGKTLSPR RVYIGDDLEA LYSSYVWHLI DHGADLAVPD LTTHFVFVNL
TAGTPFAPTR PETVYAKVDS VTSRAAGALP QGWSPHWLRH THATALLLSG AAPHVVMRRL
GHADIQTTLS TYGWVTEDAE MRTLAQWRNY VAGWKGLTP
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