| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_5374 |
|---|
| Symbol | |
|---|
| ID | 4647090 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 5750177 |
|---|
| End bp | 5751586 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639808849 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_956151 |
|---|
| Protein GI | 120406322 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.00219714 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATGCGAG CAGTGCTGCG TTACGGCGTC TGCAGACAAG TCGACGATCG GGCCGGGTTG
ATCGCCGCGG CGCGCACCGC ATTCGGTGAG CTCGGGGCGG CGGCAGGCCT CGCCGACATC
GCCGGCTACG CCGGGGTGAG TCCCACCGTT CTGTGCCGGC ACTTCGGCGA CAGGGACGGA
TTGGTCGCCG CGGTGCTCGA CGACCTCGTC GCATCCCTCG GGGATGACGA GGACCCGCCG
ATCGTCGCCG CCGGCGCAGT GTCCGGCGCA GTGTCCGGCG CTCGATTCCA CCCGAAGTAC
GCGGTTGCGC CGTTGGCCGC GCTCGCGACC GTGATGCCGA TGATGCCCGC CCAGGCCACG
GCGGCGACCA GCGCCGAACC GACGACAGCC ACGACGGCCG TCGAGCCGGC GGCCACGGTG
CTGACGCTCA CCCCGCTGTG GCCGGTGTGG CCGCTGGAGT ACGCACTGCA GGGGTCGCTG
TGCGAGTCCG GCGGCTGCGA CCTGATCCCG TACCTGCCGT TCTCGACCGC TGCCGGTGTC
AGCCTGCTCA CCGATCGCCT GTCCTCGACC GCGGACGTCA GCCGCGTGGC GAGCGACACC
GACACGGTGG TGTTCGGCTA CAGCCACGGC GCCGTGGTGG CCGCGGAGTG GCTGGCCGAG
CACGCCGAAG ATCCCCTGGC CCCCGCCGCC GGGCAGCTGT CCTTCGTCTT GATCGGGAAC
CCGACGCGCG CCTACGGCGG GACCTATCCG GCGCTGCCGC AGACCCAGTA CCAGGTGATC
GACGTCGTCC GGCAGTACGA CCCTGTCGCC GACTTCCCCG CCGATCCTTT CAACCTGCTC
GCGATGCTCA ATATCGGCGC GGGCATCCTG TCCTCGGTTC ACCTCGATTA CACGGATGTG
GCCCTCGACG ATCCCGGGAA CACCGTGTGG ACCGAAGGCA ACATCACCTA CGTCTTCGTG
CCCACCCGGA ACCTGCCTCT GCTGACGCCG CTGCGGCTGA TCGGGCTGGG TTGGCTGGCC
GACGAGCTCA ACGAACCGCT GAAGGAGATC GTGGAACGGG CCTACGACCG CCCCTACCTC
CCCGAGGCCG AGCCGGTGGA TCCTCCTGCC GAACCCGCCC CCGACCCCGT CGTCGAGCCG
GTAGCCGAGA CCCTCGACGC GGCAACGGAC ACGGCCGTCG CCACCCCGGC GTCGTCGCCC
GACGACGCCG CCGCACCCGA CACCACGGCG GACGGTCCGG AGGTCAGCCC AGCAGACGTC
GACCCGGCCG CCACTGAACC CGACACCGAG GAGACGACGG CGGCGGCCAC GGAGGAGACC
ACGGCGGACC CGGCCGTCAC CGTCGAGGAC GTGTCGCAGG AATCCGCGGC GACCGCTGAA
CCGGACGCGG CGGACACCGC AGGCGGCTGA
|
|---|
| Protein sequence | MMRAVLRYGV CRQVDDRAGL IAAARTAFGE LGAAAGLADI AGYAGVSPTV LCRHFGDRDG
LVAAVLDDLV ASLGDDEDPP IVAAGAVSGA VSGARFHPKY AVAPLAALAT VMPMMPAQAT
AATSAEPTTA TTAVEPAATV LTLTPLWPVW PLEYALQGSL CESGGCDLIP YLPFSTAAGV
SLLTDRLSST ADVSRVASDT DTVVFGYSHG AVVAAEWLAE HAEDPLAPAA GQLSFVLIGN
PTRAYGGTYP ALPQTQYQVI DVVRQYDPVA DFPADPFNLL AMLNIGAGIL SSVHLDYTDV
ALDDPGNTVW TEGNITYVFV PTRNLPLLTP LRLIGLGWLA DELNEPLKEI VERAYDRPYL
PEAEPVDPPA EPAPDPVVEP VAETLDAATD TAVATPASSP DDAAAPDTTA DGPEVSPADV
DPAATEPDTE ETTAAATEET TADPAVTVED VSQESAATAE PDAADTAGG
|
|---|
| |