Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_5340 |
Symbol | |
ID | 4647774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 5717116 |
End bp | 5717604 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639808815 |
Product | CarD family transcriptional regulator |
Protein accession | YP_956117 |
Protein GI | 120406288 |
COG category | [K] Transcription |
COG ID | [COG1329] Transcriptional regulators, similar to M. xanthus CarD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTTTA AGGTCGGAGA CACCGTCGTC TATCCACACC ACGGTGCTGC GTTGATCGAG GCGATCGAAA CCCGGACCAT CAAAGGCGAG CAGAAGGAAT ACCTCGTCCT GAAGGTGTCG CAGGGAGATC TCACCGTTCG TGTTCCCGCA GATAACGCAG AGTACGTGGG TGTGCGTGAT GTCGTCGGAC AGGAGGGTCT GGACAAGGTC TTCCAGGTGC TGCGCGCCCC GCACACCGAA GAGCCGACCA ACTGGTCGCG TCGGTACAAG GCCAATCTGG AGAAGCTGGC CTCCGGTGAC GTGAACAAGG TCGCCGAGGT CGTCCGTGAC CTGTGGCGCC GCGATCAGGA GCGTGGGCTG TCCGCCGGCG AGAAGCGGAT GCTGGCCAAG GCTCGGCAGA TTCTGGTGGG TGAGCTCGCG CTCGCCGAGA ACACCGATGA CGCCAAGGCC TCGACGATTC TGGACGAAGT ACTCGCTGCA GCGTCCTGA
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Protein sequence | MIFKVGDTVV YPHHGAALIE AIETRTIKGE QKEYLVLKVS QGDLTVRVPA DNAEYVGVRD VVGQEGLDKV FQVLRAPHTE EPTNWSRRYK ANLEKLASGD VNKVAEVVRD LWRRDQERGL SAGEKRMLAK ARQILVGELA LAENTDDAKA STILDEVLAA AS
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