Gene Mvan_5327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5327 
Symbol 
ID4644452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5705800 
End bp5706564 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content69% 
IMG OID639808802 
ProductLamB/YcsF family protein 
Protein accessionYP_956104 
Protein GI120406275 
COG category[R] General function prediction only 
COG ID[COG1540] Uncharacterized proteins, homologs of lactam utilization protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGG TCTCCGTCGA CCTCAACGCC GACCTCGGCG AGGGCTTCGG CGTGTGGACG 
CTCGGCGACG ACGACGCGAT GCTCGACATC GTCACGTCCG CCAACGTGGC GTGCGGATTT
CACGCCGGCG ACCCCGCAAC CCTGGTGAGG GTGTGCCGAG CGGCCGCCGC ACGTGGAGTG
CGGATCGGCG CCCAGGTGAG CTACCGCGAT CTGGCCGGGT TCGGCAGGCG CTTCATCGAC
GTCAGCGCCG AGGACCTGGT CGCCGACGTG ATGTACCAGA TCGGCGCGTT GTCGACGCTG
GCCGCCGTCG CCGGCTCGTC GGTGTCCTAT GTGAAACCAC ATGGGGCGCT GTACAACGCG
ATTACCACCA ATCACCTGCA GGCCCACGCC GTGGCCGAGG CCGTTCACAC CGTCGACCCC
ACGCTGCCGG TCCTCGGGCT GGCCGGGTCG GTGTTCTTCA CCGCGGCAAC CGAACTGGGG
CTGCGCACCG TTCCCGAGGC CTTCGCCGAC CGGGCCTACC GGCCCGACGG GCAACTGGTC
TCCCGCCGGG AACGCAACGC GGTGCTGCGC GACGTCGACG AGATCGTCGA CCGCGTCATC
TCCATGGTCA CCACCGGACG GGTCGCCGCC GTCGACGGTT CGACCATCCC CATCACCGTG
GAATCCGTTT GTGTGCACGG GGATTCACCC GGGGCGGTGC AGATCGCGAC CGCGGTGCGC
GAACGGCTGA TCGCCGACGG CGTGACGCTG GCCCCGTTCA GCTGA
 
Protein sequence
MTTVSVDLNA DLGEGFGVWT LGDDDAMLDI VTSANVACGF HAGDPATLVR VCRAAAARGV 
RIGAQVSYRD LAGFGRRFID VSAEDLVADV MYQIGALSTL AAVAGSSVSY VKPHGALYNA
ITTNHLQAHA VAEAVHTVDP TLPVLGLAGS VFFTAATELG LRTVPEAFAD RAYRPDGQLV
SRRERNAVLR DVDEIVDRVI SMVTTGRVAA VDGSTIPITV ESVCVHGDSP GAVQIATAVR
ERLIADGVTL APFS