Gene Mvan_5311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5311 
Symbol 
ID4644436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5689111 
End bp5691261 
Gene Length2151 bp 
Protein Length716 aa 
Translation table11 
GC content72% 
IMG OID639808786 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_956088 
Protein GI120406259 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.17244 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGGCAT CAACGTCCGC TCCCACCACC GACGACCAGT CCGCTGCGCG GGACCTGGTG 
CGGACCTGGG CCGCAGCGTC GCGCGCCGTC GAGGCGGCGC GCGACGTCGA GCAGGGCGAC
CCGGACGCGT GGCGGGCGCC CTACGCCGGC CTGGCCGAAC TGGGGATCTT CGGGGTGGCG
CTGCCCGAGG AGCACGGCGG AGCCGACGGG ACGGTGTCCG ACCTGGCCGC GATGATCGAC
GAGGCGGCCG CCGCGCTGGT GCCGGGCCCG GTCGCGACCA CGGCACTGGC CACGCTGGTG
CTGTCCGGCC CGCACGCCGA CCTGCTGGAG GAGCTCGCGA CGGGTGAGCG CACCGCGGGC
GTCACGCTGA CCGCCGACCT GGACTACGCC GACGGTCGGG TGTCGGGCAG CGCGCCGTAC
GTGCTGGGCG CGGCCGCGAC GGGGGTATTG CTGCTGCCAG CCGGTGACAC GTGGCTGCTG
GTCGACGCCG CGGCGGACGG TGTGACGGTC GAGTCACTCA AGGCCACCGA TTTCTCCCGC
CCGCTGGCCC GTGTCGTGCT GGACGGAGCG CCCGCCGAGG TGTTGGACGT GCCGTCCCAG
CAGGTCGTCG ACATGGCGGC CACGCTGCTG GCCGCCGAGG CGGCCGGCCT GGCCCGCTGG
CTGCTGGACA CCGCGACCGA GTACGCGAAG GTGCGTGAAC AGTTCGGCAA GCCGATCGGC
AGCTTCCAGG CCATCAAGCA CATGTGCGCC GAGATGCTGT TGCGCTCCGA GCAGGCCTCC
GTCGCCGCGG CGGACGCAGC GAGGGCCGCC GGTGAGTCGG ACGCAGACCA GCTGTCGATC
GCCGCGGCGT TGGCCGCCTC GGTCGGCATC GAGGCGGCCA AGGCCAACGC CAAGGACTGC
ATTCAGGTGC TGGGCGGGAT CGGCATCACC TGGGAGCACG ACGCGCACCT GTACCTGCGG
CGGGCGTACG GCATCGCACA GTTCCTCGGC GGTCGGTCAC GCTGGCTGCG CCGTGTCGCC
GCGCTGACGC AGCAGGGGGT GCGCAGGGAA CTGCACATCG ACCTGGAGTC GGTGGCCGGC
CTGCGGCCCG AAATCGTTTC TGCGGTAGCC GAAGTCGCGG CCGCTCCGGA GGACAAGCGG
CAGGTCGCCC TCGCCGAGGC CCGTCTGCTG GCGCCGCACT GGCCGCCACC GCACGGCCGC
GCCGCGGGCC CGGCCGAGCA ATTGCTCATC GACCAGGAGC TGGCGGCTGC GGGCGTGGTG
CGCCCGGATC TGGTGATCGG TTGGTGGGCG GTGCCGACCA TCCTGGAACA CGGCAGCCCG
GAACAGGTCG AGCAGTTCGT TCCGCCGACG CTGCGCGGCG AGCTGACGTG GTGCCAGCTG
TTCAGCGAGC CCGGCGCGGG TTCGGACCTT GCGGCATTGC GCACCAAGGC TGTTCGGGTT
GATGACGCAT CCGCGAGCGG TGCATCAGGG CCCGGCTGGA AGCTCACCGG GCAGAAGGTG
TGGACCTCGG CGGCGCAGAA GGCGCACTGG GGCGTGTGCC TGGCCCGCAC CGACCCCGAC
GCCCCGAAAC ACAAGGGCAT CACCTACTTC CTCATCGACA TGAAGTCCCC GGGAATCGTG
ATCCGCCCGC TGCGCGAGAT CACCGGGGAC GAACTGTTCA ACGAGGTGTT CTTCGACGAC
GTGTTCGTGC CCGACGAGAT GGTGGTCGGC CAGGTCAACG ACGGCTGGCG GCTGGCACGC
ACCACGCTGG CCAACGAGCG CGTCGCGATG GCGCAGGGCA CCGCGCTGGG CAACCCGATG
GAGGAGCTGC TCCGTGTCGT CGCCCAGCTG GAAGTCGATG GTGCGCAACA GGATCAGCTC
GGTCAGCTGA TCGTCACCGC CCAGGTGGGT TCGCTGCTGG ACCAGCGGAT CGCCCAGCTC
GCGGTCGAGG GCCAGGATCC CGGCCCGCAG GCCAGCGCGC GCAAGCTCAT CGGGGTGCGG
TACCGCCAGG CGCTGGCCGA GTTCCGGATG GATCTGTCCG ACGGTGCCGG CGCGGTCGAG
AACCGACAGG TGCACGACTT CCTGAACACC CGCTGCCTGA CCATCGCCGG CGGCACCGAG
CAGATCCTGT TGACCATGGC CGGCGAGCGG CTGCTGGGCC TGCCGCGCTG A
 
Protein sequence
MSASTSAPTT DDQSAARDLV RTWAAASRAV EAARDVEQGD PDAWRAPYAG LAELGIFGVA 
LPEEHGGADG TVSDLAAMID EAAAALVPGP VATTALATLV LSGPHADLLE ELATGERTAG
VTLTADLDYA DGRVSGSAPY VLGAAATGVL LLPAGDTWLL VDAAADGVTV ESLKATDFSR
PLARVVLDGA PAEVLDVPSQ QVVDMAATLL AAEAAGLARW LLDTATEYAK VREQFGKPIG
SFQAIKHMCA EMLLRSEQAS VAAADAARAA GESDADQLSI AAALAASVGI EAAKANAKDC
IQVLGGIGIT WEHDAHLYLR RAYGIAQFLG GRSRWLRRVA ALTQQGVRRE LHIDLESVAG
LRPEIVSAVA EVAAAPEDKR QVALAEARLL APHWPPPHGR AAGPAEQLLI DQELAAAGVV
RPDLVIGWWA VPTILEHGSP EQVEQFVPPT LRGELTWCQL FSEPGAGSDL AALRTKAVRV
DDASASGASG PGWKLTGQKV WTSAAQKAHW GVCLARTDPD APKHKGITYF LIDMKSPGIV
IRPLREITGD ELFNEVFFDD VFVPDEMVVG QVNDGWRLAR TTLANERVAM AQGTALGNPM
EELLRVVAQL EVDGAQQDQL GQLIVTAQVG SLLDQRIAQL AVEGQDPGPQ ASARKLIGVR
YRQALAEFRM DLSDGAGAVE NRQVHDFLNT RCLTIAGGTE QILLTMAGER LLGLPR