Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_5287 |
Symbol | |
ID | 4644677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 5663934 |
End bp | 5665058 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639808762 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_956064 |
Protein GI | 120406235 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.66157 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.272331 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGACCTGA CCTTCGACGA CGCCACGTCC GAGTTCCGGG CCGAGGTACG TGATTTCCTC GCCGCGAACA AGAGCGCGTT CCCGACCAAG TCCTATGACA CCGCAGAAGG GTTCGAACAG CACCGCCGGT GGGACAAGGT GCTTTTCGAC GCCGGGCTGT CGGTGATCAC GTGGCCCGAG AAGTACGGCG GCCGTGATGC GTCGCTGCTG CAGTGGATCG TGTACGAGGA GGAGTACTTC CGCGCCGGCG CCCCGGGCCG GGCCAGCGCC AACGGCACCT CGATGCTGGC GCCGACACTG TTCGCGCACG GTACCGAGGA ACAGCTGGAC CGCATCCTGC CGAAGATGGC CAGCGGCGAG GAGATCTGGG CGCAGGCATG GTCGGAGCCG GAGTCCGGCA GCGATTTGGC CTCGCTGCGT TCGACGGCGA CCAGGACCGA CGGCGGCTGG CTGCTCAACG GGCAGAAGAT CTGGAGTTCG CGGGCGGTGT TCGGCGAGCG GGCGTTCGGG TTGTTCCGCT CGGATCCGGA AGCACAGCGC CACAAGGGGC TTACGTACTT CATGTTCGAC CTGAAGGCCA AGGGGGTCAC GGTCCGCCCC ATCGCTCAGC TCGGCGGCGA CACCGGCTTC GGCGAAATCT TCCTCGACGA CGTCTTCGTG CCCGATCAGG ACGTGATCGG TGGCGTGCAC GACGGGTGGC GCGCGGCGAT GAGCACCTCG AGCAACGAGC GCGGCATGTC GCTGCGCAGC CCGGCCCGTT TCCTCGCTCC TGCCGAACGC CTTGTCGCGC AATGGAAGGA CAATCCCGAC CCGGCGTTCA CCGATCGGGT GGCCGACGCC TGGATCAAGG CCCAGGCCTA CCGGCTGCAC ACGTTCGGCA CCGTCACCCG GGTGAGCAAC GGCGGTGAAC TGGGCGCGGA ATCGTCGATC ACCAAGGTGT TCTGGTCCGA GCTCGACGTC GCCCTGCACC AGACCGCGCT GGATCTGCGC GGCGCAGACG GTGAGCTGAC CGATTCGGTG ACCGAGGGTC TACTGTTCGC GCTCGGCGGG CCGATCTATG CCGGGACCAA CGAGATCCAA CGCAACATCA TCGCCGAGCG GCTCCTGGGC CTGCCCCGAA AGTAG
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Protein sequence | MDLTFDDATS EFRAEVRDFL AANKSAFPTK SYDTAEGFEQ HRRWDKVLFD AGLSVITWPE KYGGRDASLL QWIVYEEEYF RAGAPGRASA NGTSMLAPTL FAHGTEEQLD RILPKMASGE EIWAQAWSEP ESGSDLASLR STATRTDGGW LLNGQKIWSS RAVFGERAFG LFRSDPEAQR HKGLTYFMFD LKAKGVTVRP IAQLGGDTGF GEIFLDDVFV PDQDVIGGVH DGWRAAMSTS SNERGMSLRS PARFLAPAER LVAQWKDNPD PAFTDRVADA WIKAQAYRLH TFGTVTRVSN GGELGAESSI TKVFWSELDV ALHQTALDLR GADGELTDSV TEGLLFALGG PIYAGTNEIQ RNIIAERLLG LPRK
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