Gene Mvan_5287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5287 
Symbol 
ID4644677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5663934 
End bp5665058 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content67% 
IMG OID639808762 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_956064 
Protein GI120406235 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.66157 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.272331 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACCTGA CCTTCGACGA CGCCACGTCC GAGTTCCGGG CCGAGGTACG TGATTTCCTC 
GCCGCGAACA AGAGCGCGTT CCCGACCAAG TCCTATGACA CCGCAGAAGG GTTCGAACAG
CACCGCCGGT GGGACAAGGT GCTTTTCGAC GCCGGGCTGT CGGTGATCAC GTGGCCCGAG
AAGTACGGCG GCCGTGATGC GTCGCTGCTG CAGTGGATCG TGTACGAGGA GGAGTACTTC
CGCGCCGGCG CCCCGGGCCG GGCCAGCGCC AACGGCACCT CGATGCTGGC GCCGACACTG
TTCGCGCACG GTACCGAGGA ACAGCTGGAC CGCATCCTGC CGAAGATGGC CAGCGGCGAG
GAGATCTGGG CGCAGGCATG GTCGGAGCCG GAGTCCGGCA GCGATTTGGC CTCGCTGCGT
TCGACGGCGA CCAGGACCGA CGGCGGCTGG CTGCTCAACG GGCAGAAGAT CTGGAGTTCG
CGGGCGGTGT TCGGCGAGCG GGCGTTCGGG TTGTTCCGCT CGGATCCGGA AGCACAGCGC
CACAAGGGGC TTACGTACTT CATGTTCGAC CTGAAGGCCA AGGGGGTCAC GGTCCGCCCC
ATCGCTCAGC TCGGCGGCGA CACCGGCTTC GGCGAAATCT TCCTCGACGA CGTCTTCGTG
CCCGATCAGG ACGTGATCGG TGGCGTGCAC GACGGGTGGC GCGCGGCGAT GAGCACCTCG
AGCAACGAGC GCGGCATGTC GCTGCGCAGC CCGGCCCGTT TCCTCGCTCC TGCCGAACGC
CTTGTCGCGC AATGGAAGGA CAATCCCGAC CCGGCGTTCA CCGATCGGGT GGCCGACGCC
TGGATCAAGG CCCAGGCCTA CCGGCTGCAC ACGTTCGGCA CCGTCACCCG GGTGAGCAAC
GGCGGTGAAC TGGGCGCGGA ATCGTCGATC ACCAAGGTGT TCTGGTCCGA GCTCGACGTC
GCCCTGCACC AGACCGCGCT GGATCTGCGC GGCGCAGACG GTGAGCTGAC CGATTCGGTG
ACCGAGGGTC TACTGTTCGC GCTCGGCGGG CCGATCTATG CCGGGACCAA CGAGATCCAA
CGCAACATCA TCGCCGAGCG GCTCCTGGGC CTGCCCCGAA AGTAG
 
Protein sequence
MDLTFDDATS EFRAEVRDFL AANKSAFPTK SYDTAEGFEQ HRRWDKVLFD AGLSVITWPE 
KYGGRDASLL QWIVYEEEYF RAGAPGRASA NGTSMLAPTL FAHGTEEQLD RILPKMASGE
EIWAQAWSEP ESGSDLASLR STATRTDGGW LLNGQKIWSS RAVFGERAFG LFRSDPEAQR
HKGLTYFMFD LKAKGVTVRP IAQLGGDTGF GEIFLDDVFV PDQDVIGGVH DGWRAAMSTS
SNERGMSLRS PARFLAPAER LVAQWKDNPD PAFTDRVADA WIKAQAYRLH TFGTVTRVSN
GGELGAESSI TKVFWSELDV ALHQTALDLR GADGELTDSV TEGLLFALGG PIYAGTNEIQ
RNIIAERLLG LPRK