Gene Mvan_5219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5219 
Symbol 
ID4644320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5588869 
End bp5589900 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content69% 
IMG OID639808694 
Productluciferase family protein 
Protein accessionYP_955996 
Protein GI120406167 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID[TIGR03559] probable F420-dependent oxidoreductase, Rv3520c family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.195941 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTAG GTCTGCAACT CGGTTATTGG GGGGCGCAGG CGCCGACCAA CCACGCCGAG 
CTCGTCGCCA CCGCCGAGGA GGTGGGCTTC GACACGGTGT TCACCGCGGA GGCGTGGGGC
TCGGACGCCT ACACCCCGTT GGCGTGGTGG GGACGCGAGA CCACGCGGAT GCGGCTGGGC
ACGTCGGTGA TCCAGCTGTC GGCACGTACC CCGACCGCGT GCGCGATGGC GGCGCTGACG
CTGGACCATC TGTCGGGCGG ACGGCACATC CTGGGTCTCG GCGTCTCCGG CCCGCAGGTG
GTCGAGGGCT GGTACGGCGC GAAGTTCCCC AAGCCTCTGG CCCGCACCCG CGAGTACATC
GACATCCTGC GCCAGGTGTG GGCCCGCGAG GCCCCGGTGC ACAGCGACGG GCCGCACTAT
CCGTTGCCGT TGACCGGTGA GGGCACCACC GGCCTCGGCA AGAACCTCAA GCCGATCACG
CATCCGCTGC GGGCGGACAT CCCGGTGATG CTCGGCGCCG AGGGTCCCAA GAACGTCGCG
TTGGCTGCCG AGATCTGCGA CGGATGGCTG CCGATCTTCT ACTCGCCGCG CATCGCGGCG
ATGTACAACG AGTGGCTCGA CGAGGGATTC GCCCGTCCCG GCGCCCGGCA CACCCGGGAG
ACGTTCGAGA TCTGCGCGAC GGCGCAGGTC GTCGTCACCG ACGACCGTGC CGAGATGATG
GAGCTGATGA AGCCGCACCT GGCGCTCTAC ATGGGCGGCA TGGGTGCCGA GGACACCAAC
TTCCACGCCG ACGTGTACCG CCGGATGGGC TACGCCGAGG TGGTCGACGA CGTGACGAAA
TTGTTCCGCA GTGGCCGCAA GGACGAGGCG GCCAAGGTCA TCCCCGACGA GTTGGTGGAC
GACTCCGCGA TCGTGGGCGA CCTCGGTTAT GTGCAGGAGC AGATCAAGGC CTGGGAGGCC
GCCGGCGTCA CGATGATGGT GGTCGGCGCA CGGTCGCCCG AGCAGATCCG GGATCTGGCG
GCCCTGGTCT GA
 
Protein sequence
MKLGLQLGYW GAQAPTNHAE LVATAEEVGF DTVFTAEAWG SDAYTPLAWW GRETTRMRLG 
TSVIQLSART PTACAMAALT LDHLSGGRHI LGLGVSGPQV VEGWYGAKFP KPLARTREYI
DILRQVWARE APVHSDGPHY PLPLTGEGTT GLGKNLKPIT HPLRADIPVM LGAEGPKNVA
LAAEICDGWL PIFYSPRIAA MYNEWLDEGF ARPGARHTRE TFEICATAQV VVTDDRAEMM
ELMKPHLALY MGGMGAEDTN FHADVYRRMG YAEVVDDVTK LFRSGRKDEA AKVIPDELVD
DSAIVGDLGY VQEQIKAWEA AGVTMMVVGA RSPEQIRDLA ALV