Gene Mvan_5116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5116 
Symbol 
ID4647553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5478492 
End bp5479004 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content65% 
IMG OID639808590 
Productpyridoxamine 5'-phosphate oxidase-related, FMN-binding 
Protein accessionYP_955893 
Protein GI120406064 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00582982 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.597944 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTCA CCACGCTCGA GATCGACTTC ATGAAGCAGG CGGACCTCGG CAGGCTGGCG 
ACCATCCAGC CCGACGGCAC GCCACAGAAC AGCCCGGTCG GCTTCACCTA CAACGAACAG
CTCGGGACCA TCGACATCGC CGGCTACGAG ATGGCGAAGA GCCGCAAGTA CCGCAACCTC
GCCGACAACG ACAGGGTGGC GTTGGTCGTG GACGACATCA CTCCACGCGA CCCACTGCGC
ACGCGAGGAG CAATTCAACC ACTGCGCACG CGAGGAGCAA TTCAACCGGA GCGCACGCGA
GGAGCAATTC AACCGGAGCG TGTGCGGTGC CTGGAGATCC GCGGCACCGC AGTGCAGGCC
GAGGACGGCG GCCGCCCGAT CATCCGCGTC ACGCCGCGGC GGGTGATCAG CTTCGGGATC
GACGACCAGG AGACCGAGCC CCATCAGCTG GTCGCCCACG TGCGGAACGT CGGCGTTGAA
CAGCAAGTGC CGCAACGGCT CCCGCTTCGT TGA
 
Protein sequence
MTFTTLEIDF MKQADLGRLA TIQPDGTPQN SPVGFTYNEQ LGTIDIAGYE MAKSRKYRNL 
ADNDRVALVV DDITPRDPLR TRGAIQPLRT RGAIQPERTR GAIQPERVRC LEIRGTAVQA
EDGGRPIIRV TPRRVISFGI DDQETEPHQL VAHVRNVGVE QQVPQRLPLR