Gene Mvan_5109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5109 
Symbol 
ID4647546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5472107 
End bp5473192 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content73% 
IMG OID639808583 
Productglycine cleavage T protein (aminomethyl transferase) 
Protein accessionYP_955886 
Protein GI120406057 
COG category[R] General function prediction only 
COG ID[COG0354] Predicted aminomethyltransferase related to GcvT 
TIGRFAM ID[TIGR03317] folate-binding protein YgfZ 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.80079 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCCG TACCCGCACC CGACATTGGA CCCGACGCCG GCGCGGTCTG GCATTACGGC 
GATCCGCTCG GCGAGCAACG GGCCGCCGCG CAGGGCGCGG TCGTCGTGGA CCGCTCGCAC
CGGGCGGTGC TGTCGCTGAC CGGAGCCGAA CGCAATTCGT GGCTGCACAC GATCTCCAGC
CAGCACGTCA GCGACCTCGC CGACGGCACC GTGACCGAGA ATCTGAGCCT CGACGGGCAG
GGCCGTGTCG AAGATCACTG GGTGCAGACC CAGCTCGACG GGCGCACCGT TCTGGACACC
GAGCCGTGGC GCGGGGAGCC GCTGCTGAGC TTCCTCCGCA AGATGGTGTT CTGGGCCGAT
GTCGTGGTCG AACCTGCCGA TCTGGGCGTG TTGTCGCTGC TCGGGCCCGG TCTGACCGAC
CCCGCGGTAC TCGACGCCGT GGGCCTGCCC GCACTGCCGG CCCCCAACAG CGCCGTCGAA
CTGCCCGGCG GCGGCTTCAT CCGGCGGCTG CCGGGGCCTG CGGTCGAGGT GGACGTCGTG
GTGCCGCGCG ACGAGCTCGC GGCGTGGCGC GACAGGTTGG TGGCCGCCGG GGTCCGGCCC
GCCGGGGTCT GGGCGTACGA AGCGCACCGC GTCGCCGCCC GTCGACCGCG TCTCGGGGTG
GACACCGACG AGCGCACCAT TCCTCATGAA GTGGGCTGGA TCGGCGGCCC GGGCGTCGGG
GCGGTGCACC TCGACAAGGG CTGCTACCGC GGCCAGGAGA CCGTCGCGCG CGTCCACAAC
CTGGGCAAAC CGCCACGCAT GCTGGTGTTG CTGCACCTCG ACGGCGCATC CGACCGGCCC
TCCACCGGCG ACCCGCTGCT GGCCGGCGGC CGCACCGTGG GCCGGCTCGG CACCGTCGTC
GACCACGTCG ACGAGGGCGT GATCGCCCTG GCGCTGCTCA AGCGTGGGCT GCCCGCCGAC
ACCGCGCTGA CGACCGGAGG TGAGGTGCAC GCGGCCGCCA CAATCGACCC GGACTCGATG
CCGCCCGCCG ACGGCGTGGG GGCGGGACGG CTGGCGGTGG ACCGGCTCCG CGGCGGAACC
GCGTAG
 
Protein sequence
MSAVPAPDIG PDAGAVWHYG DPLGEQRAAA QGAVVVDRSH RAVLSLTGAE RNSWLHTISS 
QHVSDLADGT VTENLSLDGQ GRVEDHWVQT QLDGRTVLDT EPWRGEPLLS FLRKMVFWAD
VVVEPADLGV LSLLGPGLTD PAVLDAVGLP ALPAPNSAVE LPGGGFIRRL PGPAVEVDVV
VPRDELAAWR DRLVAAGVRP AGVWAYEAHR VAARRPRLGV DTDERTIPHE VGWIGGPGVG
AVHLDKGCYR GQETVARVHN LGKPPRMLVL LHLDGASDRP STGDPLLAGG RTVGRLGTVV
DHVDEGVIAL ALLKRGLPAD TALTTGGEVH AAATIDPDSM PPADGVGAGR LAVDRLRGGT
A