Gene Mvan_5088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5088 
Symbol 
ID4644140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5454866 
End bp5455534 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content68% 
IMG OID639808562 
Productphosphate uptake regulator, PhoU 
Protein accessionYP_955865 
Protein GI120406036 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0704] Phosphate uptake regulator 
TIGRFAM ID[TIGR02135] phosphate transport system regulatory protein PhoU 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTACCG CGTACCACGA GCAGCTGGAG GCCCTGTCTA ACAGGCTTGG CGACATGTGC 
GGACTTGCCG GGGTCGCCAT GGAGCGAGCC ACGCAAGCCC TACTGCAGGC CGACCTGGCG
CTGGCCGAGC AGGTGATCAC CGACCATGAG CAGATCGCGG CGCTCAGCGC CCGCGCCGAG
GAGGAGGCCT TCGTCCTCCT CGCCCTGCAG GCGCCCGTCG CGGGTGATCT ACGGGCCATC
GTGAGCTCGA TCCAGATCGT GGCCGACGTC GACCGGATGG GCGCGCTGGC GCTGCATGTC
GCCAAGATCG CCCGGCGCAG GCACCCCCAG CACGCGCTGC CCGAGGAAGT CAACGGCTAC
TTCGCCGAGA TGGGCCGGGT GGCTGTCGAA CTCGGCCACA GCGCCCAGGA GGTGCTGATC
ACGCAGGATC CGGAGAAGGC CGCCCGGATC CGCGAAGAGG ACGACGCGAT GGACGACCTG
CACCGGCACC TGTTCACCGT GCTGATGGAC CGCGAATGGA AGCACGGAGT AGCCGCCGCC
GTCGACGTGA CGCTGCTCGG ACGGTACTAC GAGCGCTTCT CCGACCACGC GGTCGAGGTG
GCCCGTCGGG TCATCTTCCA GGTCACCGGG AACACCCCCA CGGAACAAGA GGTCTCCGAA
CACTACTGA
 
Protein sequence
MRTAYHEQLE ALSNRLGDMC GLAGVAMERA TQALLQADLA LAEQVITDHE QIAALSARAE 
EEAFVLLALQ APVAGDLRAI VSSIQIVADV DRMGALALHV AKIARRRHPQ HALPEEVNGY
FAEMGRVAVE LGHSAQEVLI TQDPEKAARI REEDDAMDDL HRHLFTVLMD REWKHGVAAA
VDVTLLGRYY ERFSDHAVEV ARRVIFQVTG NTPTEQEVSE HY