Gene Mvan_5025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5025 
Symbol 
ID4644635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5375117 
End bp5376232 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content72% 
IMG OID639808496 
Productcitrate synthase 2 
Protein accessionYP_955803 
Protein GI120405974 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.761314 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCGG TGTCGAAGGA TTTCGTCCCT GGACTGGCCG GGGTGGTGGC GTTCGAGACC 
GAGATCGCCG AACCCGACAA GGATGGTGGG GCGCTGCGCT ACCGCGGCGT CGACATCCAG
GATCTGGTGA GCCACCGGGT CACCTTCGGC GACGTGTGGG GGCTCCTGGT CGACGGGCGC
TTCGGCCGGG GACTGCCGCC CGCCGAGCCG TTCCCACTGC CGATCCACAG CGGCGACGTC
CGCGTCGACG TGCAGGCCGG CCTGGCCATG CTGGCACCGA TCTGGGGTTA CCCGCCGATC
CTCGACATCG AGGACGAGAC CGCGCGCGAC CAGCTCGCAC GGGCCTCGGT GATGGCCCTG
TCTTACGTCG CCCAGTCCGC GCGCGGCATC TACCAGCCGG CCGTGCCACA GCGGACCGTC
GACGAATGCG ACACGGTCAC CGCACGTTTC ATGACGCGCT GGCAGGGCGA GCCCGACCCG
CGCCACATCG AGGCCATCGA CGCGTACTGG GTGAGCGCCG CCGAACACGG CATGAACGCC
TCCACCTTCA CCGCACGGGT CATCGCGTCC ACGGGTGCGG ACGTGGCCGC CGCGCTGTCG
GGCGCGATCG GCGCGATGAG CGGCCCGCTG CACGGCGGCG CCCCCGCGCG CGTGATCCCG
ATGATCGAGG AGGCCGAGCG CACCGGCGAC GCCCGGTCCG TCGTCAAGGG CATCCTGGAC
CGCAACGAGA AGCTGATGGG CTTCGGGCAC CGGGTGTACC GGGCCGAGGA TCCGCGGGCG
CGGGTGCTGC GCGCCACCGC CGAGCGCCTC CAGGCGCCGC GCTACGAAGT GGCGGCGGCG
CTGGAACAGG CCGCGCTGAC CGAGTTGCGC GAGCGCAGAC CGGACCGGGC CATCGAGACC
AACGTCGAGT TCTGGGCGGC GGTGATCCTG GACTTCGCCC AGGTCCCGCC GAAGATGATG
CCCGCGATGT TCACCTGCGG CCGCACCGCG GGCTGGTGCG CCCACATCCT TGAGCAGAAG
CGGCTCGGCA AGCTGGTCCG GCCGTCGGCG ATCTACGTCG GCCCCGAGCC GCGCAGCCCG
GAGGCGGTCG AGGGCTGGGA CCTGCTCTCC CACTGA
 
Protein sequence
MTAVSKDFVP GLAGVVAFET EIAEPDKDGG ALRYRGVDIQ DLVSHRVTFG DVWGLLVDGR 
FGRGLPPAEP FPLPIHSGDV RVDVQAGLAM LAPIWGYPPI LDIEDETARD QLARASVMAL
SYVAQSARGI YQPAVPQRTV DECDTVTARF MTRWQGEPDP RHIEAIDAYW VSAAEHGMNA
STFTARVIAS TGADVAAALS GAIGAMSGPL HGGAPARVIP MIEEAERTGD ARSVVKGILD
RNEKLMGFGH RVYRAEDPRA RVLRATAERL QAPRYEVAAA LEQAALTELR ERRPDRAIET
NVEFWAAVIL DFAQVPPKMM PAMFTCGRTA GWCAHILEQK RLGKLVRPSA IYVGPEPRSP
EAVEGWDLLS H