| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_4915 |
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| Symbol | |
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| ID | 4648848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | - |
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| Start bp | 5264986 |
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| End bp | 5267277 |
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| Gene Length | 2292 bp |
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| Protein Length | 763 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639808386 |
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| Product | ATP-dependent DNA ligase |
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| Protein accession | YP_955694 |
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| Protein GI | 120405865 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase
[COG3285] Predicted eukaryotic-type DNA primase |
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| TIGRFAM ID | [TIGR02776] DNA ligase D
[TIGR02777] DNA ligase D, 3'-phosphoesterase domain
[TIGR02778] DNA polymerase LigD, polymerase domain
[TIGR02779] DNA polymerase LigD, ligase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.735483 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.531274 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGGACC GCTATGAGCG GGTGAAGCTG ACCAACCCGG ACAAGGTGCT GTACCCGGCG
ACGGGGGATC GACGTAGGGC CGTCACCAAA GCAGAGGTTT TCGACTACTA CGTCAACGTC
GCCGCGGCGA TGCTGCCCCA CATCGCCGGC CGCGCCGTCA CCCGCAAGCG GTGGCCCAAC
GGCGTCACCG AGGAGTCGTT CTTCGAGAAG CAGCTGGCGT CCTCGGCGCC GGACTGGCTG
GGCCGCGGCA CCATCGTGCA CAAGTCCGGA ACCACCACCT ACCCCGTCAT CGACACCGTC
GAGGGACTGG CCTGGATCGC CCAGCAGGCC GCGCTGGAGG TGCACGTCCC TCAGTGGCGA
TTTGTGGACG GTTCGGTCGG CCCGGCGACA CGCATCGTCT TCGATCTCGA TCCGGGCGAG
GGGGTGACCT TCCGCCAGCT CTGCGAAGTG GCCAACGAGG TCCGGGACCT GCTCGCCGAC
ATCGGTCTGC GGACGTTCCC GTTGACCAGC GGCAGCAAGG GCCTGCACCT CTATGTGCCG
CTGGACGAGC CGATCAGTTC CCGGGGAGCG TCGGTGTTGG CCAAGAGGGT GGCGCAACAA
CTCGAGCAGG CGATGCCGAT GCAGGTCACG GCGACGATGA CGAAAAGCCT GCGGACAGGC
AAGGTGTTCG TGGACTGGAG CCAGAACAAC GCCAACAAGA CGACCATCGC CCCGTATTCG
CTTCGGGGGC GCGAACATCC GACGGTCGCC GCGCCGCGCA CCTGGGAGGA GATCTCCGAC
CCCGACCTGA GACAGCTGAC GTTCGACGAG GTTCTCGACC GGCTGGACCG CGACGGTGAT
CTGCTCGCCG GGCTCGATCC GCCGGTTCCG GTGCCGGACC GGCTCACCCG GTACCGCAGC
ATGCGCGACA CCGCCAAGAC GCCTGAGCCG ATTCCGGGCG ACGCGCCGAC GACCGGGAAC
AACGACAAGT TCGTCATCCA GGAACACCAT GCCCGCCGCC TGCACTACGA CTTCCGGCTG
GAACGCGACG GCGTGCTGGT CAGTTGGGCA GTGCCCAAGA ACCTGCCCGA CACACCGTCG
GTGAACCACC TCGCCGTGCA CACCGAGGAC CACCCGATGG AGTACCTGAC CTTCGCGGGT
GAGATCCCCA GGGGCGAGTA CGGCGGCGGC GAGGTCTACA TCTGGGACAC CGGCACCTAC
GAGACCGAGA AGTTCAGGGA CAACCCGCCC GACGGCCCGG ACCGCGGCGG CGAGGTCATC
GTGACGCTGC ACGGCGAGAA GATCGACGGC CGGTACGCGC TGATCCAGAC CGACGGCAAG
AACTGGCTTG CGCACCGGAT GAAGGACCAG CAACGGCCCA CCGCGGCGGA TCTGGCGCCG
ATGCTGACGA CCCACGGCTC TGTGCAGCGG CTCACCAAGG GGCAGTGGGC TTTTGAGGGC
AAGTGGGACG GATACCGCTT GCTGGTCGAG GCCGATCACG GCAGGTTGGC ACTGCGCTCG
CGCAACGGCC GCGACGTCAC CGCCGAGTAC CCGCAGTTGC AGGCGCTGGC CGCCGACCTC
GCCGACCACC ACGTGATCCT CGACGGGGAG GCGGTGGCGC TCGACGAGTC GGGGGTGCCG
AGTTTCCGGG AGATGCAGAA CCGGGCCCGC TCGACCCGGG TCGAGTTCTG GGCGTTCGAC
ATTCTGTTTC TCGACGGCCG ATCGCTGCTG CGGGCCAAGT ACACCGACCG CCGCCGGGTG
TTGGAAGCGC TGGCCGACGG GGGTGGACTG ATCGTGCCCC CGTTGATCGG CGCCGACACC
GGGGCGGAGG CGCTGGAGAC CGCGCGCAAG AGGGGCTGGG AGGGTGTGGT CGCCAAGAAG
CGGGACTCCA CCTACCAGCC GGGCAGGCGG TCGTCGTCGT GGATCAAGGA CAAGCTGTGG
AACACGCAGG AGGTGGTGAT CGGCGGCTGG CGGCAAGGCG AGGGTGGACG CACCAGCGGG
ATCGGCGCGT TGATGCTCGG CATCCCCGCC GGCGGTGTGG CCGGCGGCCT GCAGTTCGTC
GGCCGCGTCG GCACGGGCTT CACCGAGAAG GAGCTGGCGT CGTTGAAGGA GACGCTGGCA
CCGCTGCACA CCGATGAATC ACCCTTCGCC ACAGAGCTTC CCAAGCAGGA CGCAAAAGGC
GTGACCTTCG TGCGGCCCGA ACTGGTGGGA GAGGTGCGCT ACAGCGAACG CACCTCGGAC
AACCGGTTGC GGCAGCCGAG CTGGCGCGGA CTGCGCACGG ACAAGACGCC CGACGAGGTG
GTCTGGGAGT AG
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| Protein sequence | MVDRYERVKL TNPDKVLYPA TGDRRRAVTK AEVFDYYVNV AAAMLPHIAG RAVTRKRWPN
GVTEESFFEK QLASSAPDWL GRGTIVHKSG TTTYPVIDTV EGLAWIAQQA ALEVHVPQWR
FVDGSVGPAT RIVFDLDPGE GVTFRQLCEV ANEVRDLLAD IGLRTFPLTS GSKGLHLYVP
LDEPISSRGA SVLAKRVAQQ LEQAMPMQVT ATMTKSLRTG KVFVDWSQNN ANKTTIAPYS
LRGREHPTVA APRTWEEISD PDLRQLTFDE VLDRLDRDGD LLAGLDPPVP VPDRLTRYRS
MRDTAKTPEP IPGDAPTTGN NDKFVIQEHH ARRLHYDFRL ERDGVLVSWA VPKNLPDTPS
VNHLAVHTED HPMEYLTFAG EIPRGEYGGG EVYIWDTGTY ETEKFRDNPP DGPDRGGEVI
VTLHGEKIDG RYALIQTDGK NWLAHRMKDQ QRPTAADLAP MLTTHGSVQR LTKGQWAFEG
KWDGYRLLVE ADHGRLALRS RNGRDVTAEY PQLQALAADL ADHHVILDGE AVALDESGVP
SFREMQNRAR STRVEFWAFD ILFLDGRSLL RAKYTDRRRV LEALADGGGL IVPPLIGADT
GAEALETARK RGWEGVVAKK RDSTYQPGRR SSSWIKDKLW NTQEVVIGGW RQGEGGRTSG
IGALMLGIPA GGVAGGLQFV GRVGTGFTEK ELASLKETLA PLHTDESPFA TELPKQDAKG
VTFVRPELVG EVRYSERTSD NRLRQPSWRG LRTDKTPDEV VWE
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