Gene Mvan_4883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_4883 
Symbol 
ID4648816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5230078 
End bp5230971 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content70% 
IMG OID639808354 
ProductDNA-formamidopyrimidine glycosylase 
Protein accessionYP_955662 
Protein GI120405833 
COG category[L] Replication, recombination and repair 
COG ID[COG0266] Formamidopyrimidine-DNA glycosylase 
TIGRFAM ID[TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGAGC TGCCCGAGGT CGAAGCCCTC GCCGATCACC TGCGCCGCCA CGCGGTCGGC 
CTGACCGTCG GCCGGGTCGA CGTCGCGGCG CTGTCGGTGC TCAAGACCTT CGACCCGCCG
ATCTCCGCGC TGTACGGGCA GGAAGTCACC GGAGCCAACC GGTGGGGGAA GTACCTCGGG
CTGCAGGCCG GTGAGTTGCA TCTGATCACC CATCTGTCGC GCGCGGGCTG GCTGCGCTGG
TCGGACAAGC TCGCCGCTGC GCCGCTGAAG CCAGGCAAGG GACCGATCGC GCTGCGGGTC
CATCTGGGCC CCCCGGGGGA GTCCCCGGGG CCGAATGTCG CCGCCGGGGC GGCTCCGGGC
TTCGACCTGA CCGAGGCCGG TACCCAGAAA CGCCTCGCGG TGTGGCTGGT CACCGACCCG
ATGGCGGTCC CGCAGATCGC CTCGCTGGGG CCGGACGCGC TGTCGTTGAC CGGGCAGGCG
CTGGCGGAGG TGCTCGGTGG GCAGTCGGGG CGGATCAAGA CCGTCATCAC CGACCAGAAG
GTGATCGCCG GGATCGGCAA TGCCTACAGC GACGAGATCC TGCACGTCGC CAAGCTGTCG
CCGTTCGCCA CGGCGAACAA ACTGACGCCG TCGCAACTGG TGACGCTGCA CGACGCGATG
ATCTCGGTGC TGACCGACGC GGTGACCCGG TCCGTCGGCC AGCAGGCGGC CACCCTCAAA
GGGGAGAAGC GTTCCGGCCT GCGGGTGCAC GCCCGCACCG GCCTGCCTTG CCCGGTCTGC
GGGGACACCG TCCGCGAGGT GTCCTTCGCC GACAAATCGT TCCAGTACTG CCCGACGTGC
CAGACCGGCG GCAAGGTGCT CGCCGACCGC CGCATGTCCC GACTTCTCAA ATAG
 
Protein sequence
MPELPEVEAL ADHLRRHAVG LTVGRVDVAA LSVLKTFDPP ISALYGQEVT GANRWGKYLG 
LQAGELHLIT HLSRAGWLRW SDKLAAAPLK PGKGPIALRV HLGPPGESPG PNVAAGAAPG
FDLTEAGTQK RLAVWLVTDP MAVPQIASLG PDALSLTGQA LAEVLGGQSG RIKTVITDQK
VIAGIGNAYS DEILHVAKLS PFATANKLTP SQLVTLHDAM ISVLTDAVTR SVGQQAATLK
GEKRSGLRVH ARTGLPCPVC GDTVREVSFA DKSFQYCPTC QTGGKVLADR RMSRLLK