| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_4671 |
|---|
| Symbol | |
|---|
| ID | 4649235 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 5010390 |
|---|
| End bp | 5011580 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639808141 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_955452 |
|---|
| Protein GI | 120405623 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.525963 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGCCC ACCAGCCGCT GCCGACGACC ACCACGATCG AGAACCTGCT CGACCTCGAC
TCGCTGCTGA GCGCCGAGGA CCGTGACCTG CGCACGATGG TGCGCGGGTT CGGGGAGCAG
CGGTTGCGGC CGCAGATCGC GGAATGGTTC GAGGCCGGCC AGGTTCCGGT CCGCGAGCTG
GCCGCCGAGA TCGGCAAGCT GGGCTTGTTG GGAATGCATC TGCAGGGGTA CGGGTGCAGC
GGCTCGACGG CGACGGCCTA CGGGCTGGTG TGCCAGGAGC TGGAGGCGGT CGACAGCGGG
CTGCGCAGCC TGGTGTCGGT GCAGGGGTCG CTGGCGATGT TCGCGATTCA CCGGTGGGGC
AGCGAGGAGC AGCGCACGCG ATGGCTGCCC GGGATGGCGG CGGGCGAACT GATCGGGTGC
TTCGGCCTCA CCGAGCCGGA CTTCGGCTCC AATCCGGGTG GCATGCGCAC CACCGCGCGC
CGCGACGGCT CGGACTGGAT CCTCAACGGT TCGAAGATGT GGATCACCAA TGCCTCGGTC
GCCGACGTCG CGATCATCTG GGCGCGGTCG AAGGAAGGGG TGCTGGGGTT CGCGGTGCCG
ACGTCAACGC CGGGGTTCCA CGCCACCGAG ATGACCCGCA AGCTGTCGCT GCGCGCGTCG
GTCACCTCCG AGATCCACCT CGACGACGTC CGGGTCCCCG AGGACGCCAG ACTGCCGGAG
GCCCAAGGAC TCAAGGCGCC GTTGAGCTGC CTGTCCGAGG CGCGCTTCGG GATCGTGTTC
GGTGCGGTGG GCGCGGCCCG GGACTGCCTG CAGACCACGC TGGACTACGT CGGCACCCGC
GCGGTGTTCG ACCGGCCGCT GGCGGGATAC CAACTGACAC AGGCGAAGAT CGCCGACATG
GCGGTCGAGC TCGGCAAGGC CCAACTCCTC GCGCTGCACC TGGGCCGGCT CAAGGACGAA
GGCAGGATCC GTCCCGAACA GGTCAGCGTC GGAAAGCTCA ACAACGTCCG CGAAGCCATC
AAGATCGCCC GCCAGTGCCG AACCCTGTTG GGCGCCAACG GGATCACCTT GGAGTATCCC
GTGCTGCGGC ACGCCAACAA CCTGGAGTCG GTGCTGACCT ACGAGGGCAC CTCGGAGGTG
CACCAACTGG TGATCGGCGA GGCGCTCACC GGCGTCGGCG CGTTCCGCTA G
|
|---|
| Protein sequence | MPAHQPLPTT TTIENLLDLD SLLSAEDRDL RTMVRGFGEQ RLRPQIAEWF EAGQVPVREL
AAEIGKLGLL GMHLQGYGCS GSTATAYGLV CQELEAVDSG LRSLVSVQGS LAMFAIHRWG
SEEQRTRWLP GMAAGELIGC FGLTEPDFGS NPGGMRTTAR RDGSDWILNG SKMWITNASV
ADVAIIWARS KEGVLGFAVP TSTPGFHATE MTRKLSLRAS VTSEIHLDDV RVPEDARLPE
AQGLKAPLSC LSEARFGIVF GAVGAARDCL QTTLDYVGTR AVFDRPLAGY QLTQAKIADM
AVELGKAQLL ALHLGRLKDE GRIRPEQVSV GKLNNVREAI KIARQCRTLL GANGITLEYP
VLRHANNLES VLTYEGTSEV HQLVIGEALT GVGAFR
|
|---|
| |