Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_4623 |
Symbol | |
ID | 4646640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 4962448 |
End bp | 4963245 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639808093 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_955404 |
Protein GI | 120405575 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTCC GGGGGAAACG CGTACTGATC ACAGGGGCGT CGCGGGGGAT CGGTGAGTCG TTGGCACACA ACTTCGCCGG CGCTGGCGCC AGAGTAGCGC TGGTCGCTCG CAGCCGGGAT TCCCTGGAGT CGCTTGCGGT CGAGCTCGGA GGCACCGTCC ACCCCGCCGA TCTCTCTGAC TCGACCCAGG TTTCCGGCCT TATCCGGAGG GTCGAAGACG ATGGCGGCCC GATCGACGTC TTGGTCAACA ACGCCGGTAT CGAAAGTACG GCGTGCTTCA CCGACGCACC CGAAGACGAA TTGCGCCGAG TCACCGACGT CAATTATCTG GCGCCGGCCG AGCTCTGCCG CCAGGCGATA CCCGGGATGC TGCGACGCGG CGGCGGCCAC ATCGTCAACG TGTCTTCGCT CAGTGGCATC GTGCTGTTCC CCGGCCTCGT CAGCTACTCA GCTTCCAAGG CGGCGCTGTC GCACTTCACC GCGGGGCTGC GAACAGACTT CCGTGGTTTG CCGATCGGCA CCACTCTCGT GGAGTTGGGG CCCATCCCAA CGGACCTGCT CGCCAAGATC GACAACTACG AGCCCACCGC AAAGTCCTTT CAGCGTGCGT ACCGCTGGGG GGTTGCCGTC GACACCCCCC GCGAAAGAGT GGCCGAAGAG GTCGTCAAGG CCGTCCTCAA GGGTCGCCGA CATGTGCGGC TTCCCAAGCG GTCTGCCCCA CTCGCGATGT TGGCTGAGGC GCCCCGCCGT ATCGCCGAGA TCATCCTCAC CGGTGTTCCG CACCAGGCGA AGTCGTAG
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Protein sequence | MELRGKRVLI TGASRGIGES LAHNFAGAGA RVALVARSRD SLESLAVELG GTVHPADLSD STQVSGLIRR VEDDGGPIDV LVNNAGIEST ACFTDAPEDE LRRVTDVNYL APAELCRQAI PGMLRRGGGH IVNVSSLSGI VLFPGLVSYS ASKAALSHFT AGLRTDFRGL PIGTTLVELG PIPTDLLAKI DNYEPTAKSF QRAYRWGVAV DTPRERVAEE VVKAVLKGRR HVRLPKRSAP LAMLAEAPRR IAEIILTGVP HQAKS
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