| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_4407 |
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| Symbol | |
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| ID | 4648998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | - |
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| Start bp | 4729356 |
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| End bp | 4731044 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639807878 |
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| Product | putative GAF sensor protein |
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| Protein accession | YP_955189 |
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| Protein GI | 120405360 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG2508] Regulator of polyketide synthase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.543064 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTGAGC CGCGATCGGT GATCGCGGCT CAGACAGCTT TGATCGCTGC ACTTCGTGAC
GTGGTCTCGG CTCGCAGCGT CGCCGATGTG GAATCGGCGA CCTTGGCGGC GGTGCGGTCC
CTGCTGAGCG CTGATGCCGC ATTCTGGATG GACCGGGTCG ACGACGGGTT TGCCATGACG
GCGCTGTCAG GCCTCATCCA GCCGGAGTCC CATGAGCTGT CCCTCGTGCC GCCTGGTGCG
GGCTTGGCCG CCGAGATCGT GGCAAACGAC GCCCCGGCGT CGAGCAGCGA CTACACCGTA
GATCCCCGTG CAATACCTGC TTTTGCGGCG ATGTTCCGTC GCGAGAACAT CAGGTCGACC
GCCGGCGCAC CGATGCGGTC ATCCGAGGGT GTGGTGGGTG TCCTGTTCGT CTTTGCCCGC
CGAAGCCGCG AGTTCACCGA AGACGAAATG CAGCTGCTGA TGTCCATTGC TGGCGTCGCG
CGCGCGTTGC GAGAACGACT CCGGGAGGGT GAGTTCCAGC GCGAGCTTCT CGAGCAGGAG
CGCAGCAGAG CAGCGGCCGG CGACAGGTTA CTCCGCGCGG CAGAGACTTT CAGCAGCTCG
ATGCTGCGCG GTCAGCCGCT GGCCGCGGGA CTCGAAGCCG CCTCCGATGA ACTTGGTGTG
CGTCTGCACG TGCGGGGCCT GCCCGCCCCG GGGAGCCCCA CCAGCCACAT GCTGCCCATC
GAAGATGCCC CAACGGTTTC CAGTGGACCC GAGGCGCGAA TTCCGGGAGC GGATCTCGCG
GTCCTCAGCG CCGACGGCGC GCTACCGGAG ATGCAGTTGG CACTGCTCGC ACAGCTTATC
GGAATCGATT TCCGTAGACA GCGCGTCGAA TTGGAGACCG AGCTCGCGCT CACCGACCAA
ATGGTGCACA GTCTGCTGAC CGGAGACTTC CAGGAACTGG AACGGTTGTG GTCACGAACC
GCCTTGCTCG GTATGAACCC CGCGGTGCCT CGCGTGTTGG TCAGCATCGG TCGTGACAGA
CCCGTCGACC GGATGCTGCT CGACCGCATA CGGCGTGAGA TGCGGTCGCG CATCAGTGGG
GGATACTCCA CCACCTATGG GGGTGACGTC GTGCTCCTGT GTCCGGTGCC GGAGGTCGAG
CAAGAGGCGA AGCTGGTCGG CCAGGTGGAG TCGATCGTCA CGGCTTGCCG ACCGGAGCGG
CTTACCGCAG GGATCGGTCC GGTATGCCGA AAGGCGGACG ACTATCCGCT CGGGGTCCGC
GAGGCACTGT TCGCCAGACA GGTTGCCGCG CAGAGCAGGA CGGGCAAGGC GGTGGTGTCA
TCGGCGGAGC TGGGCATGTA TCGGTTGTTC GCCCATGTGG GGGGCACCGA CGCCCTGCTC
GGCGCGGTGC TGGAGACCCT CGGACCGTTG TTGGATGCCG ATGGCCGCGA CGGATCGGAT
CTGCTCAACA CCCTGCACGC TTTCCTGGAG CACGACAGGC GGATTGCCGA AACCGCACGG
GCGCTGCATC TGCACGTCAA CACCCTGCGG TACCGGGTGG ACCGGATTGC CCGGTTACTC
AAGACGGACC TGGATGACCC CGAGAAGCGG TTCTTCATTC TGCTGGCACT ACGCCTGAGA
GGTGTCGTCG GACTCGGGCC CAACGACAGC CGGCAAGCCC CTTCTTCCGC TGGCGAAAAC
GTCCAATGA
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| Protein sequence | MSEPRSVIAA QTALIAALRD VVSARSVADV ESATLAAVRS LLSADAAFWM DRVDDGFAMT
ALSGLIQPES HELSLVPPGA GLAAEIVAND APASSSDYTV DPRAIPAFAA MFRRENIRST
AGAPMRSSEG VVGVLFVFAR RSREFTEDEM QLLMSIAGVA RALRERLREG EFQRELLEQE
RSRAAAGDRL LRAAETFSSS MLRGQPLAAG LEAASDELGV RLHVRGLPAP GSPTSHMLPI
EDAPTVSSGP EARIPGADLA VLSADGALPE MQLALLAQLI GIDFRRQRVE LETELALTDQ
MVHSLLTGDF QELERLWSRT ALLGMNPAVP RVLVSIGRDR PVDRMLLDRI RREMRSRISG
GYSTTYGGDV VLLCPVPEVE QEAKLVGQVE SIVTACRPER LTAGIGPVCR KADDYPLGVR
EALFARQVAA QSRTGKAVVS SAELGMYRLF AHVGGTDALL GAVLETLGPL LDADGRDGSD
LLNTLHAFLE HDRRIAETAR ALHLHVNTLR YRVDRIARLL KTDLDDPEKR FFILLALRLR
GVVGLGPNDS RQAPSSAGEN VQ
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