Gene Mvan_4349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_4349 
Symbol 
ID4647344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp4663950 
End bp4665380 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content68% 
IMG OID639807820 
Productdiaminopimelate decarboxylase 
Protein accessionYP_955132 
Protein GI120405303 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0019] Diaminopimelate decarboxylase 
TIGRFAM ID[TIGR01048] diaminopimelate decarboxylase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.344454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.204157 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGCGC ATCCGGCCGG CCCCCGGCAC GCCGAAGAGG TGCATCCCGT CGCCACGCCC 
GATCGGCCAC GGACCGCTGC CGAGGTGCTG CAGTTGGCTC CGAATGTATG GCCGCAGAAC
GCGGTTCGCG GAGCGGACGG TGTGGTGTCG ATCGCAGGCG TGTCGGTGGC CGACATCGCC
GCGGAGTTCG GCACGCCGGT GTTCGTCATC GACGAGGCGG ATTTCCGGGC GCGCTGCCGC
GACATCGCCG CCGCTTTCGG TGGTGGTGAG CACGTCCGGT ACGCCGCCAA GGCGTTCCTG
TGCACCGAGG TGGCGCGTTG GATCGACGAA GAGGGTCTGT CCCTCGACGT CGCCAGTGGG
GGAGAGCTGG CCGTCGCGCT GCACGCCGGC TTTCCCGCGG AACGTATTGC GTTGCACGGC
AACAACAAAT CGGTCGCCGA GCTGACCGCG GCGGTCGAGG CCGGCATCGA GCACGTGGTG
GTCGACTCGA TGACCGAGAT CGACCGTCTG GACAAGATCG CCGGCGAGGC CGGTGTGGTG
CAGGACGTGC TCATCCGCGT CACCGTCGGA GTCGAGGCGC ACACCCACGA GTTCATCTCC
ACCGCGCACG AGGACCAGAA GTTCGGGCTG TCGCTGGCCA GCGGGGCGGC GATGACCGCG
GTGCGCCGGG TGTTCGAGAC CGACCACCTG CGCCTGGTCG GCCTGCACAG CCACATCGGT
TCACAGATCT TCGACGTCGC CGGTTTCGAG TTGGCGGCCC ACCGCGTGAT CGGGCTGCTT
CGGGACGCGG TCGCGGAGTT CGGTGTCGAG AAGACCTCTC AGATGTCGAT CGTCGATCTC
GGTGGCGGAC TGGGTATCTC GTATCTTCCA CACGACGACC CGCCCCCGAT GGGTGAACTC
GCGGACAAGC TGCACGCGAT CGTGCGCCAC GAGTCCGCCG CCGTCGGGCT GCCCGCCCCC
AGGCTGGTGG TGGAACCCGG CCGCGCCATC GCGGGTCCCG GCACGATCAC GCTCTACGAG
GTCGGCACCG TCAAAGACGT GGCGATCTCG TCGGACAGGA ACCGTCGGTA CGTGAGCGTC
GACGGCGGTA TGAGCGACAA CATCAGGACG TCGCTCTACG ACGCCGAATA CGACGTCCGG
TTGGTGTCGC GGACCAGCAA CGCAGAGCCG ACGCTGTCCC GGGTGGTGGG GAAACACTGT
GAAAGCGGCG ACATCGTGGT GCGCGACGCC TGGATACCCG ACGACGTCGG TCCGGGGGAC
CTGCTGGGCG TAGCGGCCAC CGGCGCATAC TGCTATTCGA TGTCGAGCCG CTACAACCTG
ATCGGCCGGC CGGCCGTGGT GGCCGTGCGT GACGGGCGGG CGCGCCTGAT CCTGCGCCGG
GAGACGTTCG ACGACCTCTT GAGTCTGGAA GTGAGTGAGG TGAAGCGGTG A
 
Protein sequence
MIAHPAGPRH AEEVHPVATP DRPRTAAEVL QLAPNVWPQN AVRGADGVVS IAGVSVADIA 
AEFGTPVFVI DEADFRARCR DIAAAFGGGE HVRYAAKAFL CTEVARWIDE EGLSLDVASG
GELAVALHAG FPAERIALHG NNKSVAELTA AVEAGIEHVV VDSMTEIDRL DKIAGEAGVV
QDVLIRVTVG VEAHTHEFIS TAHEDQKFGL SLASGAAMTA VRRVFETDHL RLVGLHSHIG
SQIFDVAGFE LAAHRVIGLL RDAVAEFGVE KTSQMSIVDL GGGLGISYLP HDDPPPMGEL
ADKLHAIVRH ESAAVGLPAP RLVVEPGRAI AGPGTITLYE VGTVKDVAIS SDRNRRYVSV
DGGMSDNIRT SLYDAEYDVR LVSRTSNAEP TLSRVVGKHC ESGDIVVRDA WIPDDVGPGD
LLGVAATGAY CYSMSSRYNL IGRPAVVAVR DGRARLILRR ETFDDLLSLE VSEVKR