| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_4181 |
|---|
| Symbol | |
|---|
| ID | 4648209 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 4489487 |
|---|
| End bp | 4490008 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639807648 |
|---|
| Product | carboxymuconolactone decarboxylase |
|---|
| Protein accession | YP_954964 |
|---|
| Protein GI | 120405135 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2128] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.917886 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCGCCGC TACCCACCGA GGAGTGGGAC GACGAGGTGC TCGACGCGCT CGCCCCGCTG
CTGCCCCCGA GTCGCAGCAA TCCCCGCGAC GCGGGCAACG TCCTGGCCAC GCTCGTCCGT
CATCCCGCCC TGACCCGCGC CTACCTGCAC TTCAACGCGC ATCTGCTGCT CGCGTCGACG
TTGTCGCCCA GGATCCGGGA GGTGGCGCTG TTGCGGGCCG TGCACGTGCG CCGGTCGGAT
TACCTGTGGG AGCACCATAT TCCGATCGCT CAGCGGGCCG GCATCACGCC CGACGAGATA
GACGCCATCC GGCAGGGGCG GCCCGCCGAC GAGATCGACC GCCTCGTGGT GGGGGCCGTC
GACGAGTTGG ACGCCGCCAA CACGGTCAGC GACGCGACCT GGTCGGCCCT ACGTGACCAC
TTCGACGAGC GTCAGGTGCT GGACCTGATC TTCACCGTGG GCTGCTACCA ACTCCTGGGT
GCGGCCGTGA ACACGCTGGG TGTGCAACCG GAACCACACT GA
|
|---|
| Protein sequence | MSPLPTEEWD DEVLDALAPL LPPSRSNPRD AGNVLATLVR HPALTRAYLH FNAHLLLAST
LSPRIREVAL LRAVHVRRSD YLWEHHIPIA QRAGITPDEI DAIRQGRPAD EIDRLVVGAV
DELDAANTVS DATWSALRDH FDERQVLDLI FTVGCYQLLG AAVNTLGVQP EPH
|
|---|
| |