Gene Mvan_4090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_4090 
Symbol 
ID4648698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp4381843 
End bp4383825 
Gene Length1983 bp 
Protein Length660 aa 
Translation table11 
GC content72% 
IMG OID639807555 
Productcarbamoyl-phosphate synthase L chain, ATP-binding 
Protein accessionYP_954873 
Protein GI120405044 
COG category[I] Lipid transport and metabolism 
COG ID[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit 
TIGRFAM ID[TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.734303 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGGCA CAGTCCTGGT GGCCAATCGC GGCGAGATCG CGGTGCGGGT GATCCGCACT 
TTGCGCGCCA TGGGAATTCG TTCGGTGGCG GTGTTCAGCG ACGCAGACGC AGGAGCCCGG
CATGTCGCCG AGGCCGATGT CGCGGTGCGC ATCGGGCCCG CGCCGGCGCG TCAGAGTTAC
CTGTCTGTCG AGGCGCTGCT CGCGGCTGTT CGCCGCACCG GCGCGCAGGC CGTGCATCCG
GGCTATGGAT TCCTCTCGGA GAACGCGCAA TTCGCCGAGG CGTTGGACGC GGCGGGGATC
GCGTTCATCG GCCCGCCGGT GGCGGCGATC CAGACGATGG GCGACAAGAT CTCGGCCAAG
GCCGCGGTGT CGGAGTTCGG CGTCCCTGTG GTGCCGGGCA TCTCACGTCC GGGGCTCACC
GATCAGGATC TGATCGCCGG TGCCGCCGAC GTCGGTTTCC CGGTGCTCGT GAAACCGTCG
GCAGGCGGTG GGGGCAAGGG CATGCGGGTC GTGCAGGACG CCAGTGAATT GCGCGCTGCC
CTCGTCTCCG CGCGCCGTGA GGCGGCCTCG GCGTTCGGGG ACGACACCCT GTTCCTGGAA
CGGTTCGTCC TGAACCCGCG TCACATCGAG GTGCAGGTGC TCGCCGACGC GCACGGCAAC
GTCGTGCATC TCGGCGAGCG CGAATGCAGC CTGCAGCGGC GCCACCAGAA AGTCATCGAG
GAGGCCCCGT CGCCACTGCT CGACCCGCAG ACCCGGGCCA GGATCGGCGC CGCCGCCTGC
GACACCGCGC GCAGCGTCGA CTACACCGGG GCGGGCACGG TCGAGTTCAT CGTCTCCGCC
GACCGGCCCG ACGAGTTCTT CTTCATGGAG ATGAACACCC GCCTTCAGGT GGAACATCCG
GTCACCGAGA TGGTGACCGG CCTGGACCTG GTCGAGCTGC AGGTCCGCAT CGCCGCGGGC
GAGAAGCTGC CGATCGCGCA GGACGACATC CGGCTCGACG GGCACGCCGT CGAGGCCCGT
GTGTACGCCG AAGACCCGGC CCGCGGCTTC CTGCCGACCG GCGGGGACGT CCTCGCGCTG
CGGGAACCCG CCGGGGCCGG TGTGCGGGTG GACTCCGGCC TGACCCGCGG CACGGCGGTC
GGCAGCGACT ACGACCCGAT GCTGGCCAAG GTGATCGTCC ACGCCGGGGA CCGCCCGACC
GCGTTGCGCG CCCTCGATGC GGCACTGGCC GACACCGCGG TCCTGGGCCT GACCACCAAC
GTCGAGTTCC TGCGTTTCCT GTTGGCCGAC CCCGACGTGG CCGCCGGGAA CCTGGACACC
GGCCTGCTGG ACCGCCGTCT CCCGGATTTC GCGCCCGCTC CGGCCACCGA CGACGAACTG
ATCGCCGCCG CCGCCTATCG CTGGCTGCGG TCCTGGCCGG TGGCCCCGTC GAGTCCGTGG
GAGGTGCCCT CGGGATGGCG CATCGCCGGG CGCGCCGCGA CACCGTTCCG GCTGCACGCG
GGGGAGCGGA CCGACCACGT GTGGCTGACC GGCACACCCG GGGATGCGAC GGCCACCGTC
GAGGGCGGCC GAACCCGGAC GCTGCGTGCG AGTTTGGTCG CTGACCGGCT GGCGGTCACC
GTGGACGGGA TGCGCGCCGA GTACCTGGTG GCCGGTGCCG GCGGGCAGGT GTGGTTGGCC
GGGCCGGACC GCGTGACAAT GGTCGAGGAG GTCCGGGAAG CCCCGGTGCG GCCCGACGAC
GCCCACAGCG GCGACGCCGA GCTCACCAGC CCGATGCCGG GCGCTGTGGT CGCCGTCGGC
GTCGACGACG GCGCCACGGT CACCGCCGGG ACCGTCGTCG TCACGGTCGA GGCGATGAAG
ATGGAGCACG CGCTGGCCGC CCCCGTCGAC GGGGTGGTGG AACTGCTGGT CAGTGCGGGC
GAGCAGGTGA AGGTGGGCCA GGTCCTGGCC CGGATAACGG CAATCGAGGA GCCGCAGTCA
TGA
 
Protein sequence
MFGTVLVANR GEIAVRVIRT LRAMGIRSVA VFSDADAGAR HVAEADVAVR IGPAPARQSY 
LSVEALLAAV RRTGAQAVHP GYGFLSENAQ FAEALDAAGI AFIGPPVAAI QTMGDKISAK
AAVSEFGVPV VPGISRPGLT DQDLIAGAAD VGFPVLVKPS AGGGGKGMRV VQDASELRAA
LVSARREAAS AFGDDTLFLE RFVLNPRHIE VQVLADAHGN VVHLGERECS LQRRHQKVIE
EAPSPLLDPQ TRARIGAAAC DTARSVDYTG AGTVEFIVSA DRPDEFFFME MNTRLQVEHP
VTEMVTGLDL VELQVRIAAG EKLPIAQDDI RLDGHAVEAR VYAEDPARGF LPTGGDVLAL
REPAGAGVRV DSGLTRGTAV GSDYDPMLAK VIVHAGDRPT ALRALDAALA DTAVLGLTTN
VEFLRFLLAD PDVAAGNLDT GLLDRRLPDF APAPATDDEL IAAAAYRWLR SWPVAPSSPW
EVPSGWRIAG RAATPFRLHA GERTDHVWLT GTPGDATATV EGGRTRTLRA SLVADRLAVT
VDGMRAEYLV AGAGGQVWLA GPDRVTMVEE VREAPVRPDD AHSGDAELTS PMPGAVVAVG
VDDGATVTAG TVVVTVEAMK MEHALAAPVD GVVELLVSAG EQVKVGQVLA RITAIEEPQS