Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_4011 |
Symbol | |
ID | 4647467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 4291014 |
End bp | 4292000 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639807473 |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_954794 |
Protein GI | 120404965 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.131793 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTTCA AGCGACTCGC GGCCTTCGCC GGGGCGGGCG TTCTGGCCAT GGGGATCGTG TCGTGCTCGT CCACCGGGGG CGCGCCTGAG CAGTCCGGCG ATGGTGGAGG CGGGGGGACC GTCGACACGC CCCGCATGAC GATCGCGATG ATCACTCACG AGGTGCCCGG CGATTCGTTC TGGGACCTTG TCCGCAAGGG CGCTGAAGCG GCGGCGAAGA AGGACAACAT CGAGCTGCGC TACTCGAACG ACCCGGAGGC GCCCAACCAG GCGAACCTGG TGCAGTCCGC GATCGACAGC AACGTCGACG GCATCGCCGT CACGCTGGCC AAGCCGGACG CCATGCAGGC CGCAGTGAAA TCCGCTGAGT CCAAGGGCAT TCCGGTGGTG GCCTTCAACG CGGGCATGGA TTCCTGGAAG GCGATGGGCG TCAAGGAGTA CTTCGGCCAG GACGGGCGCA TCGCCGGCCA GGGCGTGGGC GACCGGTTGC GCGCCGAAGG CGCCACGAAA TCCATCTGCG TCATCCAGGA GCAGGGCCAC GTCGATCTTG AGGCGCGCTG CGCCGGAGTC AAGGAGACGT TCCCGGCGAC CGAGATCCTC AACGTCAACG GCAAGGACAT GCCGTCGGTG GAATCGACGA TCACCGCCAA GTTGCAGCAG GACCCGAGCA TCGACTACGT CGTCACGCTC GGTGCTCCGT TCGCACTGAC CGCCGTGCAA TCGGCCAAGA ACGCCGGAAG CAGCGCCAAG ATCGGCACCT TCGACACCAA TGCCGCACTG GTCGAGGCGA TCCAGAATGG TGACGTGCAG TGGGCGGTGG ACCAGCAGCC CTATCTGCAG GGCTACCTCG CGGTCGACTC GTTGTGGCTG TACCTGAGCA ACGGCAACGT GATCGGTGGT GGACAGCCGA CGCTCACCGG CCCGGCGTTC ATCGACAAGT CGAACATCGA CGCAGTGGCC GAGTACGCCA AGGGCGGCAC CCGCTAG
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Protein sequence | MTFKRLAAFA GAGVLAMGIV SCSSTGGAPE QSGDGGGGGT VDTPRMTIAM ITHEVPGDSF WDLVRKGAEA AAKKDNIELR YSNDPEAPNQ ANLVQSAIDS NVDGIAVTLA KPDAMQAAVK SAESKGIPVV AFNAGMDSWK AMGVKEYFGQ DGRIAGQGVG DRLRAEGATK SICVIQEQGH VDLEARCAGV KETFPATEIL NVNGKDMPSV ESTITAKLQQ DPSIDYVVTL GAPFALTAVQ SAKNAGSSAK IGTFDTNAAL VEAIQNGDVQ WAVDQQPYLQ GYLAVDSLWL YLSNGNVIGG GQPTLTGPAF IDKSNIDAVA EYAKGGTR
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