| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_3969 |
|---|
| Symbol | |
|---|
| ID | 4646961 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 4243502 |
|---|
| End bp | 4244374 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639807431 |
|---|
| Product | xylose isomerase domain-containing protein |
|---|
| Protein accession | YP_954752 |
|---|
| Protein GI | 120404923 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0171269 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGATCG CGGGTGCGCC GATTTCGTGG GGGGTGTGCG AGGTACCCGG CTGGGGTTAC
CAGCTCGACT CGGACCGCGT ACTGGCGGAG ATGCGGCAGG CCGGGTTGAC CGCGACCGAG
CTGGGACCGG AGGGCTTCCT GCCCACCGAC ACCGGGGAAC TCGTGAAGCT GCTCGACGGG
TTCGGGCTCG CGTGCGTCGG TGGATTCGTG CCGGTGGTGC TGTACAAGGA CGACCATGAC
CCGGCCGACG ACCTCGCCGG ACCGCTGGAG TCGCTGGTCG CGGCCGGAGC CGGGATTGTG
GTGCTGGCGG CGGCGACCGG CCTTGACGGC TACGACGAAC GGCCCGATCT CGACGAAAAC
CATTGGGCCA CACTGCTGTC CAACCTGGAC CGACTGGCCG GTATCGTCGC CGCACGCGGT
TTGACGGCGG TGCTGCATCC GCACGTCGGC ACCATGGTGG AGACCCGCGC CGAGGTGGAC
CGCGTGCTGT CGGGATCCCA CATCCCCCTG TGCCTGGACA CCGGTCACCT GTTGATCGGC
GGGACGGATC CGCTGGCGCT GACACGAGAG GTGCCCGGAC GCATCAAGCA CGCCCATCTC
AAGGATGTCG ACGCCGCACT GGCCGCGAAG GTGCAGTCGG GTGAGCTCAG CTACACACAG
GCCGTGGCCG CGGGGATGTA CGTGCCGCTG GGGTCCGGCG ATGTCGACAT CGCGGGCATC
GTCAAGACGT TGGAGGACAA CGGCTTCGAC GGATGGTACG TGATGGAGCA GGACACCATC
CTCGACGGTG AGCCCCGCGG CGCGGGTCCG CTCGCAGATG TCGTCGCCAG CGTCGCGTTC
CTTCAGGGCG CTGCGTCCGG CGTGTCCGCG TGA
|
|---|
| Protein sequence | MKIAGAPISW GVCEVPGWGY QLDSDRVLAE MRQAGLTATE LGPEGFLPTD TGELVKLLDG
FGLACVGGFV PVVLYKDDHD PADDLAGPLE SLVAAGAGIV VLAAATGLDG YDERPDLDEN
HWATLLSNLD RLAGIVAARG LTAVLHPHVG TMVETRAEVD RVLSGSHIPL CLDTGHLLIG
GTDPLALTRE VPGRIKHAHL KDVDAALAAK VQSGELSYTQ AVAAGMYVPL GSGDVDIAGI
VKTLEDNGFD GWYVMEQDTI LDGEPRGAGP LADVVASVAF LQGAASGVSA
|
|---|
| |