Gene Mvan_3954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3954 
Symbol 
ID4646245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp4226381 
End bp4228465 
Gene Length2085 bp 
Protein Length694 aa 
Translation table11 
GC content70% 
IMG OID639807416 
Productpeptidase S9 prolyl oligopeptidase 
Protein accessionYP_954737 
Protein GI120404908 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.871148 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGTCGT GTCCGGCAAT GTGTTACGAA TTCCGCATGT CTTCCGCTCC TGAGCAACCG 
ACCCCGGCCA CGCCCGGCAC GACGGCCTTT CACGACCTCG ACGAGTTTCT GGCGCTGCCC
CGGGTGGCGG GTCTCGCGGT CTCACCCGAC GGCACCAGGG TGGTGACCAC GGTGTCGCGA
CTCGACGACA AGCGCACCGA ATTCGTCAGC GCCCTGTGGG AACTGGATCC GTCCGGGCAG
CAGCCCGCGC GGCGGCTGAC CTTCGGCGCC AAGGGCGAGT CCGCGCCGGA GTTCACCGCC
GACGGTGATC TCCTCTTCCT CGCCGCCCGG CCGACCGGTG ACGACGACGA ACCGACCCGG
AAAGCGCTGT GGCGACTACC CGCGGCAGGC GGCGAGGCGC ACGAGGTGGC GACCCTGCCC
GGCGGAGTCG ACCGGGTGAC GTCTGCACGA GAGGCCGCGA CCACGCTCAT CACGTCGGCG
ATGCTGGCGT CGGCCACCGA TGTCGACGAC GACAAGCGGT TGCGGGCGGC TCGCAAGGAC
AACAAGGTCT CGGCCGTGCT GCACGCTGGC TACCCCGTGC GCTACTGGGA CCACGACCTC
GGGCCGGAGC AGCCGCACCT GTTCGACATC ACCGAGGAAC GGCCGCGCGA TCTGACCCCG
ACGCCCGGAC AAGCCCTGCG GGAGGCGCAC TTCGACCTGA GCCGCGACGG TGCCTTCCTC
GTGACGACGT GGCAGGGGCC CGCGCCGGGG GCGGCGTTGC GCACCACCCT GGTGCACGTC
GACGTGGCCA CCGGTCGGCG GACCACGATC GTGGACGACC GGGACGCCGA CCTGGGCAAC
CCAGCCGTCT CACCCGATGG TCAGTCGGTG GCCTACACCC GCGAAACCAT CTCGACTCCC
CGGAAGGCGC CGCGGATCAC GCTGTGCCTC CTGCGTTTCG GGGAAGAACC GGTCGAGCTG
ACCACCGGGT GGGACCGGTG GCCGACGTCG GTCACGTGGT CGGCGGACGG TTCCTCGGTG
ATCATCACCG CTGACGACCA CGGCCGTGGG CCGATCTTCG CGGTCGACCC GGACACCGGC
GCGGTGCGCA CCCTCGTCGC CGACGACTTC ACCTACTCCG ACGTGCGACC GGCACCCGGT
GGGGTGTTGT TCGCGCTGCG CAGCTCCTAC GCCGCACCTC AACACCCGGT TCGCATCGAC
GCCGACGGGA CGGTCACGGT GCTGGATTGC GTTGCGCTGC CCGACCTTCC TGGAACGTTG
ACCGAGGTGA CGGCGACCAC CGCGGACGGG CGCACCGTCC GGTCGTGGAT GGTCCTGCCG
CACGGCGAGG CCGCGGGGTC ATACTCCTCG CGCGAGCGCT CGTCGGCCCC GCTGCTGCTG
TGGATTCACG GCGGGCCGCT GGCAAGCTGG AACGCCTGGC ACTGGCGCTG GAACCCGTGG
GTGATGGCCG CCCGCGGCTA CGCCGTGCTG CTCCCGGACC CGGCGCTGTC CACCGGGTAT
GGCCAGGAGT TCATCCAACG AGGCTGGGGC TCATGGGGTT TCGCGCCGTA CACGGATCTG
ATGGCGGCCA CCGACGCGGC GTGTGCGCAT CCCCGGGTCG ACGAGACACG CACCGCGGCG
ATGGGGGGCT CGTTCGGCGG CTACATGGCC AACTGGATCG CCGGGCACAC CGACCGCTTC
GCCGCGATCG TCACCCACGC CAGCCTGTGG GCGCTCGACC AGTTCGGGGC GACCACCGAC
GGTGGCTACT GGTGGGCAAG AGAGATGACG CCCGAGATGG CCGCCGCGAA CTCCCCGCAC
CTGTTCGTCT CCCAGATCGC CACGCCGATG CTCGTCATCC ACGGCGACAA GGACTATCGG
GTACCGATCG GGGAGGCGTT GCGGCTCTGG TACGAACTGC TCAGCAGCTC GGCGCTGCCT
GCCGCCGACG ACGGCAGCAC CGAGCACCGG TTCCTCTACT TTCCGTCGGA GAACCACTGG
GTGCTCAGCC CGCAACACGC CAAGATCTGG TACCAGGTGG TTCTCGCATT TCTGGCCCAT
CACGTCCTCG GTCAAGACTC CGAGCTGCCG GAAATGCTCG GGTAG
 
Protein sequence
MKSCPAMCYE FRMSSAPEQP TPATPGTTAF HDLDEFLALP RVAGLAVSPD GTRVVTTVSR 
LDDKRTEFVS ALWELDPSGQ QPARRLTFGA KGESAPEFTA DGDLLFLAAR PTGDDDEPTR
KALWRLPAAG GEAHEVATLP GGVDRVTSAR EAATTLITSA MLASATDVDD DKRLRAARKD
NKVSAVLHAG YPVRYWDHDL GPEQPHLFDI TEERPRDLTP TPGQALREAH FDLSRDGAFL
VTTWQGPAPG AALRTTLVHV DVATGRRTTI VDDRDADLGN PAVSPDGQSV AYTRETISTP
RKAPRITLCL LRFGEEPVEL TTGWDRWPTS VTWSADGSSV IITADDHGRG PIFAVDPDTG
AVRTLVADDF TYSDVRPAPG GVLFALRSSY AAPQHPVRID ADGTVTVLDC VALPDLPGTL
TEVTATTADG RTVRSWMVLP HGEAAGSYSS RERSSAPLLL WIHGGPLASW NAWHWRWNPW
VMAARGYAVL LPDPALSTGY GQEFIQRGWG SWGFAPYTDL MAATDAACAH PRVDETRTAA
MGGSFGGYMA NWIAGHTDRF AAIVTHASLW ALDQFGATTD GGYWWAREMT PEMAAANSPH
LFVSQIATPM LVIHGDKDYR VPIGEALRLW YELLSSSALP AADDGSTEHR FLYFPSENHW
VLSPQHAKIW YQVVLAFLAH HVLGQDSELP EMLG