| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_3927 |
|---|
| Symbol | |
|---|
| ID | 4645167 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 4195756 |
|---|
| End bp | 4196484 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639807389 |
|---|
| Product | UbiC transcription regulator-associated domain-containing protein |
|---|
| Protein accession | YP_954710 |
|---|
| Protein GI | 120404881 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2188] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.341956 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCTG GCACGCCCCT GTACATGACG ATCGCCGCCG ACGTCCGCGA CCGCATCGCC
ACCGAGCAGC TCGGGCCCCA CACCCTGCTG CCGTCCGAGC GCGAGCTCGC CGAGCAGCAC
GGCGTCAGCC GCATGACCGC CCGTCAGGCG CTGTCCCTGC TGGAGAGCGA GGGTGTGGTC
TACCGGAAGC CGCCCCGCGG CACGTTCGTC GCCGAGCCCC GGGTCCGATT CCACGTCGGC
AGTTTCTCCG AGGAGGTGGC GCGGATGGGC CGGCGTCCGG CCGCGCGGCA GCTGTGGGCC
GAACACCAGC TCGCCAGCCC TGCGGTGCGG CGCGCGCTCG GCCTTGCCGA GGGTGCCGCG
GTCCATGTGT TCCACCGGTT GCGCAGTGTC GACGACGTGC CGTTCGCGCT GGAGACGACG
TACCTGCCCG CCGACCTGAC CCCCGGCATC CTCGAGATCA CCGACGAGGG TTCGTTGTGG
GCCGTGCTGC GGTCGCGGTA CGGGGTCGAG CTGGCACGCT CGACCGCGGT GCTGGAATCG
ATCGTGCTCG ACGACGCCTC GAGCATGCAG TTGGGTGTGC GGGCCGGATC GGCGGGCACC
CTGCTGACCC GCACCACCGT GGACACCGCG GGGCGCTGCG TGGAGTACGC CAGGGACGTC
TACCGAGCCG ACCGCGCCTC GTTCGAGGTG TCCGAGGAGC TCAGGACCCC TCGCCTGTCG
GCTGTCTGA
|
|---|
| Protein sequence | MPAGTPLYMT IAADVRDRIA TEQLGPHTLL PSERELAEQH GVSRMTARQA LSLLESEGVV
YRKPPRGTFV AEPRVRFHVG SFSEEVARMG RRPAARQLWA EHQLASPAVR RALGLAEGAA
VHVFHRLRSV DDVPFALETT YLPADLTPGI LEITDEGSLW AVLRSRYGVE LARSTAVLES
IVLDDASSMQ LGVRAGSAGT LLTRTTVDTA GRCVEYARDV YRADRASFEV SEELRTPRLS
AV
|
|---|
| |