Gene Mvan_3912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3912 
SymbolrpsT 
ID4645152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp4182375 
End bp4182635 
Gene Length261 bp 
Protein Length86 aa 
Translation table11 
GC content64% 
IMG OID639807374 
Product30S ribosomal protein S20 
Protein accessionYP_954695 
Protein GI120404866 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0268] Ribosomal protein S20 
TIGRFAM ID[TIGR00029] ribosomal protein S20 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCAACA TCAAGTCGCA GCAGAAGCGG ATCCTCACAA ACGAGCGCCG CAGACTGCGC 
AACAAGTCGG TGAAGTCGTC GCTTCACACG GCGGTTCGCG GGTTCCGGGC TGCTGTCGAG
GCCGGTGACA AGGACAAGGC CGGCGAGCTG CTGGCTTCGA CCAGCCGCAA GCTGGACAAG
GCCGCCAGCA AGGGCGTGAT CCACAAGAAT CAGGCCGCCA ACCGCAAGTC GGCGCTGGCC
AAGGCCCTCC AGAAGATCTG A
 
Protein sequence
MANIKSQQKR ILTNERRRLR NKSVKSSLHT AVRGFRAAVE AGDKDKAGEL LASTSRKLDK 
AASKGVIHKN QAANRKSALA KALQKI