Gene Mvan_3903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3903 
Symbol 
ID4647372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp4171712 
End bp4173886 
Gene Length2175 bp 
Protein Length724 aa 
Translation table11 
GC content65% 
IMG OID639807366 
Productphage integrase family protein 
Protein accessionYP_954687 
Protein GI120404858 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACG AGCACGGCCA CCTGCACCTG CGCAGTGCCG AACACCTCGA TCCGATCTGG 
CGGCTCTGGG ACGAACTGCC AGCACAGTGG CGTGGCCCCG TGCTCGGGCC CGGCATCCAG
AACTGGGCCG CGATCACCGA GAACGATTGG CCGCACCTGG ATCTGAGCGG ACTGCCCGAC
CCGTTCGCCG CGGAGCTGGC GTGGATGGCG CACTGGCAGG CCAGTGATGG CACCCGTGTC
TCGGTGTTGG CGATGGCGCA GTTGGCCAAC ATGATTCGGA GGGCTGTCGT CGAGGGCCGT
GATATCCCCT CATCGATCCG GGCGATGGAT TACGACGCCG CCGCGGTGCT GCAGAGCTGG
TTCTATCTGA GCAGGGGCAA GCGATTGCCC TCTGCCCGAG GCCGGGGCCG GGTGCACGCT
CTGTTCGGGT TCGCCCGGCA CGCGCTGATC GCCGCCAGCC ACGACCGCCC GTGGTGGCAG
CTGGACTTCT GGCACCCGCG CTGCGATCCT CGGATCCCAC TGACCGATCG TGAACCGGTC
GCCAACTACG GCTGCTCACC CGGAGATATC CAGCTGCCGT GGGTGCGGGC CGCGGTGAAG
TGGCACCTGG GCACGATGCT CGAATCCGGG GCGCTGCGTT GGACCACGGT CAGCCAGGAA
CGTATGCGCA GCTTCCGCCG GTTCGACAAC TGGCTGACCG CCAACTTCGA CGACCCGACT
GACATCCTGG GCGACCCGAC GACCGCGGTC GAACAGGCGG CGGCATTCGC ACGGTGGACC
GCCGTAGCCG CCAACCGTGT CACCCGCCAA TCCGACACCC GCCACCTCGG AAGAACGGTG
CCGATCCGCG GAATCAACGA CGACCTGCGA GCGGTGGCCG GCCTCCTGGA GTTCGTTGCC
GCCAATCCCG GGGAAGCTCG CAGCGTTCTC GGTGCTGAGC CCTGGCAACG AGTGAACGCA
GCGCACAGCT CCAGCTGGTT CGGCCGGGTC ACCCGGATAC CGCATCAACG CGGTTTCAAC
GATGCAAACT ACATCGACGA TCACGCACTC GCGCAGATCA CTGCCGCGCT GCCGTTGATC
GGGTTGCCTC GCACCGAGCA GATGACCATC ACCCGTGGCG ATGGCACCAC CCTGACCGCC
AACGGGCTCG ACGACCCGCA AGCGATGCGG ATGATCCTGC TGCAGATCCT CACCGGCCGG
CGAGCCAGCG AGATCCGCAC CTGTGACTTC GACTGTCTTT CGGCTGCGCC CACCAGCAGC
GGAGCAGCCG CGGGTGACGA CCAATCGCTG ACCAGGTTCC GCTATGCACA AAGCAAGATC
GACGTCGCAC CAGATACCAT CCTCGTTGAC CGCGAGGTCA CCGAAGTCAT TGCCGAACAA
CACCGTTGGC TCCAAGCACA GCATCCAGAT GGCAGCAGGC GGTATCTGTT CGCCCGGCGC
CTGGGCAACC GGCGCGGTGA CAAACCTTAT CCGGCAGGCA CCTACAACTG GGTGCTACGC
ACCCTCAGCG ACCTCGTTCA GATCACCGAC GCCAAGGGAC AGGTCGTGCG GTTGAGCCAC
ACCCACCGCT TCCGCCACAC CCGGCTGACC CGGCTGGCCG AACTCGGACT GCCGATCCAC
GTCCTGCAGC GCTACGCCGG GCACGCCACC CCCACCATGA CGATGCACTA CATCGCCGCC
CGCGACGAAC ACGCCGAGCA GGCATTCCTG GCCACCGCCA AGTTGCGATC CGACGGCACC
CGCATCCAAC TCTCCAGCGA CGACCACGAC AGTCTGCACC TGTTCCGACG CGCAGACCGC
TTCCTGCCCA ACGGGTGGTG CATGCTGCCA CCGCTGCAAT CCTGCGACAA AGGCAACGCC
TGTCTGACCT GCTCGGTGTT CGTCACCGAC CACACGCACC GAGACGTGCT GGAACGTCAA
CTCCGCGAAA CAAGCGACCT GATCGACTGG ACCACAACAG AATTCGAGAA CAGGCACAGC
CGTCCCATGC CCGAGGACAA CGTATGGCTC ATCCGGCGTC ACGCTGAACA TCACGCCCTG
ACCAAGCTCC TCGACGCCCT CAACCATGCA CCGGATTCCG CAACCCACGG CGCGACAACC
AAGTGTCATC GACCTAGCGC TGGACCCGTC CCAGTGCCTC TCGACCTCAC CCGTCACCGC
AGGAGAACCC GATGA
 
Protein sequence
MIDEHGHLHL RSAEHLDPIW RLWDELPAQW RGPVLGPGIQ NWAAITENDW PHLDLSGLPD 
PFAAELAWMA HWQASDGTRV SVLAMAQLAN MIRRAVVEGR DIPSSIRAMD YDAAAVLQSW
FYLSRGKRLP SARGRGRVHA LFGFARHALI AASHDRPWWQ LDFWHPRCDP RIPLTDREPV
ANYGCSPGDI QLPWVRAAVK WHLGTMLESG ALRWTTVSQE RMRSFRRFDN WLTANFDDPT
DILGDPTTAV EQAAAFARWT AVAANRVTRQ SDTRHLGRTV PIRGINDDLR AVAGLLEFVA
ANPGEARSVL GAEPWQRVNA AHSSSWFGRV TRIPHQRGFN DANYIDDHAL AQITAALPLI
GLPRTEQMTI TRGDGTTLTA NGLDDPQAMR MILLQILTGR RASEIRTCDF DCLSAAPTSS
GAAAGDDQSL TRFRYAQSKI DVAPDTILVD REVTEVIAEQ HRWLQAQHPD GSRRYLFARR
LGNRRGDKPY PAGTYNWVLR TLSDLVQITD AKGQVVRLSH THRFRHTRLT RLAELGLPIH
VLQRYAGHAT PTMTMHYIAA RDEHAEQAFL ATAKLRSDGT RIQLSSDDHD SLHLFRRADR
FLPNGWCMLP PLQSCDKGNA CLTCSVFVTD HTHRDVLERQ LRETSDLIDW TTTEFENRHS
RPMPEDNVWL IRRHAEHHAL TKLLDALNHA PDSATHGATT KCHRPSAGPV PVPLDLTRHR
RRTR