Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_3896 |
Symbol | |
ID | 4647365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 4164843 |
End bp | 4166024 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639807360 |
Product | phage integrase family protein |
Protein accession | YP_954681 |
Protein GI | 120404852 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.466642 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTATC CGGTGGCAGT GTCTCCTGCG GGTGGGCAGC GGACCTGGAC TGTGCTCGGC GAGGACTTCG CAACGGTCGG TCCCGTCGAG GAGTGGATAG AAGCCCACCG GCACCTGTGG TCGCCGAACA CGGTGCGCGG GTATGCGACG TCGTTGGCGC AGTGGTGGAG CTTCCTGGAG CAGCGCGGGC AATCCGACGC CTGGTGTGAT GTGGGTGTCC CTGCATTCAC GGCGTTTTTG TCCTGGCAGC GCAACGGCCG CACAGTTGAG CATCGGCTGG CCGAGTCGGA CCAGGCGCCG AGTGCGTCAA CACTGGAAGT CCGCCTTGCA GCGTTGATTT CGTTTTACCG CTGGCATCAG GCGGTGTCCG GTGTGGTGGT GGCCGGACGG CTGCTTCGCG GAACACCGCG GCGCCGACCG GCCCGAGGCT TGCTGGCGCA TCTGGATGCG CGTTCGGCCC CGGCCGCGTC ATCGCTGGTG CGGGTGCGAC GCGATCGGCG CCGCGACAGA CCGCCCTTGC TGCTGCCCGA GCAGATCCAG GCCATCCTGG ATGGCTGCGC GGTCTTCGAT GCCGAGTCCG GTTTGTGGCA GGGAAACCTA CGCGATCGGT TCGTGTTCGC TCTGCTGGCC GAGACCGGGA TGCGTCTCGG GGAGGCGCTG GGCCTGCGGA TCGGCGAGTT CGTGCTCGGC CGCGGCGGCA CCGCGTATGT GCAGATCGTG CCCCGCTCGG ATAACCCTAA CGGGGCGCGG GTGAAGATGA TGCGACCGCG ACGGGTCTAT GTCGGGGCCG ACCTCGAGCG GCTGTTCGCC GACTATCTCA CCGACATCGC CTGCCGGGCA GCCGAATCCG GCATTGCTCT TACGGACACG TCGCCGTTAC TGGTGAATGT GTCCCGACCA CCGTGGTTGG CCGCATTGCG AGAGACGACG GTCCGAGAGA AAGTGGCCAC GCTGCGGCGG CGCCGCATCG GGCCACCTGG GTGGACGCCG CATTGGTTCC GTCACACTCA TGCCACCGCC TTGTTGCTCG CCGGGACGCC GGACTGGGTG GTCTCCCGGC GTCTTGGCCA CGCCCATGTG CAGACCACCC TGGACCTCTA CGGCTGGGTC CGCGACGACG AAGCCCTGCG AGCAGCCGCC AACTGGGCGT CCTACGCCAG CAGCTGGCAG GTAGCTGAAT GA
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Protein sequence | MAYPVAVSPA GGQRTWTVLG EDFATVGPVE EWIEAHRHLW SPNTVRGYAT SLAQWWSFLE QRGQSDAWCD VGVPAFTAFL SWQRNGRTVE HRLAESDQAP SASTLEVRLA ALISFYRWHQ AVSGVVVAGR LLRGTPRRRP ARGLLAHLDA RSAPAASSLV RVRRDRRRDR PPLLLPEQIQ AILDGCAVFD AESGLWQGNL RDRFVFALLA ETGMRLGEAL GLRIGEFVLG RGGTAYVQIV PRSDNPNGAR VKMMRPRRVY VGADLERLFA DYLTDIACRA AESGIALTDT SPLLVNVSRP PWLAALRETT VREKVATLRR RRIGPPGWTP HWFRHTHATA LLLAGTPDWV VSRRLGHAHV QTTLDLYGWV RDDEALRAAA NWASYASSWQ VAE
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